Protein–RNA interactions for Protein: O08784

Tcof1, Treacle protein, mousemouse

Known RBP Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcof1O08784 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tcof1O08784 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC16.17■□□□□ 0.18
Tcof1O08784 Gm11405-201ENSMUST00000118689 1556 ntBASIC16.17■□□□□ 0.18
Tcof1O08784 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tcof1O08784 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
Tcof1O08784 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tcof1O08784 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC16.17■□□□□ 0.18
Tcof1O08784 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tcof1O08784 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tcof1O08784 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Tcof1O08784 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tcof1O08784 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tcof1O08784 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Tcof1O08784 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tcof1O08784 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tcof1O08784 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tcof1O08784 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Tcof1O08784 Gm15376-201ENSMUST00000122258 783 ntBASIC16.17■□□□□ 0.18
Tcof1O08784 Gm12091-201ENSMUST00000146791 830 ntBASIC16.17■□□□□ 0.18
Tcof1O08784 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC16.17■□□□□ 0.18
Tcof1O08784 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Tcof1O08784 Mir6392-201ENSMUST00000184924 108 ntBASIC16.17■□□□□ 0.18
Tcof1O08784 Gm45059-201ENSMUST00000205558 1077 ntBASIC16.17■□□□□ 0.18
Tcof1O08784 Gm9908-201ENSMUST00000211534 448 ntBASIC16.17■□□□□ 0.18
Tcof1O08784 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Tcof1O08784 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Tcof1O08784 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tcof1O08784 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC16.17■□□□□ 0.18
Tcof1O08784 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tcof1O08784 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tcof1O08784 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
Tcof1O08784 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tcof1O08784 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Tcof1O08784 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tcof1O08784 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Tcof1O08784 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Tcof1O08784 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Tcof1O08784 CT030684.3-201ENSMUST00000227308 2445 ntBASIC16.16■□□□□ 0.18
Tcof1O08784 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tcof1O08784 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tcof1O08784 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tcof1O08784 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC16.16■□□□□ 0.18
Tcof1O08784 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC16.16■□□□□ 0.18
Tcof1O08784 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Tcof1O08784 Gm9115-201ENSMUST00000120192 1348 ntBASIC16.16■□□□□ 0.18
Tcof1O08784 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tcof1O08784 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tcof1O08784 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tcof1O08784 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tcof1O08784 Mir698-201ENSMUST00000102164 109 ntBASIC16.16■□□□□ 0.18
Tcof1O08784 Gm11478-201ENSMUST00000117851 599 ntBASIC16.16■□□□□ 0.18
Tcof1O08784 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Tcof1O08784 Gm43094-201ENSMUST00000196549 921 ntBASIC16.16■□□□□ 0.18
Tcof1O08784 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Tcof1O08784 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Tcof1O08784 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC16.16■□□□□ 0.18
Tcof1O08784 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC16.15■□□□□ 0.18
Tcof1O08784 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Tcof1O08784 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC16.15■□□□□ 0.18
Tcof1O08784 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Tcof1O08784 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tcof1O08784 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tcof1O08784 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tcof1O08784 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tcof1O08784 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Tcof1O08784 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Tcof1O08784 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tcof1O08784 Gm30238-201ENSMUST00000195528 2603 ntBASIC16.15■□□□□ 0.18
Tcof1O08784 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Tcof1O08784 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tcof1O08784 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tcof1O08784 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC16.15■□□□□ 0.18
Tcof1O08784 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC16.15■□□□□ 0.18
Tcof1O08784 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC16.15■□□□□ 0.18
Tcof1O08784 Gm7558-201ENSMUST00000193221 1165 ntBASIC16.15■□□□□ 0.18
Tcof1O08784 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC16.15■□□□□ 0.18
Tcof1O08784 AC159006.1-201ENSMUST00000226396 258 ntBASIC16.15■□□□□ 0.18
Tcof1O08784 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tcof1O08784 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tcof1O08784 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tcof1O08784 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tcof1O08784 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tcof1O08784 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tcof1O08784 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tcof1O08784 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Tcof1O08784 Gm15889-202ENSMUST00000212669 2443 ntBASIC16.14■□□□□ 0.17
Tcof1O08784 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tcof1O08784 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tcof1O08784 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tcof1O08784 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tcof1O08784 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Tcof1O08784 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Tcof1O08784 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tcof1O08784 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tcof1O08784 Matn2-206ENSMUST00000228570 2798 ntBASIC16.14■□□□□ 0.17
Tcof1O08784 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Tcof1O08784 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tcof1O08784 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Tcof1O08784 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tcof1O08784 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms