Protein–RNA interactions for Protein: J3QK56

4930544D05Rik, RIKEN cDNA 4930544D05 gene, mousemouse

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
4930544D05RikJ3QK56 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
4930544D05RikJ3QK56 Gm17795-201ENSMUST00000214505 757 ntBASIC14.78□□□□□ -0.04
4930544D05RikJ3QK56 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
4930544D05RikJ3QK56 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
4930544D05RikJ3QK56 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
4930544D05RikJ3QK56 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
4930544D05RikJ3QK56 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
4930544D05RikJ3QK56 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
4930544D05RikJ3QK56 Gm2420-202ENSMUST00000202224 2249 ntBASIC14.78□□□□□ -0.04
4930544D05RikJ3QK56 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
4930544D05RikJ3QK56 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC14.78□□□□□ -0.04
4930544D05RikJ3QK56 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
4930544D05RikJ3QK56 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
4930544D05RikJ3QK56 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
4930544D05RikJ3QK56 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
4930544D05RikJ3QK56 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
4930544D05RikJ3QK56 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
4930544D05RikJ3QK56 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
4930544D05RikJ3QK56 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
4930544D05RikJ3QK56 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
4930544D05RikJ3QK56 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
4930544D05RikJ3QK56 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
4930544D05RikJ3QK56 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.77□□□□□ -0.04
4930544D05RikJ3QK56 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
4930544D05RikJ3QK56 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
4930544D05RikJ3QK56 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
4930544D05RikJ3QK56 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
4930544D05RikJ3QK56 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
4930544D05RikJ3QK56 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
4930544D05RikJ3QK56 Mir698-201ENSMUST00000102164 109 ntBASIC14.77□□□□□ -0.05
4930544D05RikJ3QK56 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
4930544D05RikJ3QK56 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC14.77□□□□□ -0.05
4930544D05RikJ3QK56 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC14.77□□□□□ -0.05
4930544D05RikJ3QK56 Gm6912-201ENSMUST00000117218 544 ntBASIC14.77□□□□□ -0.05
4930544D05RikJ3QK56 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC14.77□□□□□ -0.05
4930544D05RikJ3QK56 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC14.77□□□□□ -0.05
4930544D05RikJ3QK56 Mir6977-201ENSMUST00000184960 64 ntBASIC14.77□□□□□ -0.05
4930544D05RikJ3QK56 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
4930544D05RikJ3QK56 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC14.77□□□□□ -0.05
4930544D05RikJ3QK56 AC139580.1-202ENSMUST00000223574 928 ntBASIC14.77□□□□□ -0.05
4930544D05RikJ3QK56 CT025535.1-201ENSMUST00000227172 491 ntBASIC14.77□□□□□ -0.05
4930544D05RikJ3QK56 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
4930544D05RikJ3QK56 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
4930544D05RikJ3QK56 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
4930544D05RikJ3QK56 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC14.77□□□□□ -0.05
4930544D05RikJ3QK56 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC14.77□□□□□ -0.05
4930544D05RikJ3QK56 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC14.77□□□□□ -0.05
4930544D05RikJ3QK56 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
4930544D05RikJ3QK56 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
4930544D05RikJ3QK56 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
4930544D05RikJ3QK56 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.05
4930544D05RikJ3QK56 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
4930544D05RikJ3QK56 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
4930544D05RikJ3QK56 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC14.77□□□□□ -0.05
4930544D05RikJ3QK56 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC14.77□□□□□ -0.05
4930544D05RikJ3QK56 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
4930544D05RikJ3QK56 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
4930544D05RikJ3QK56 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
4930544D05RikJ3QK56 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
4930544D05RikJ3QK56 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
4930544D05RikJ3QK56 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
4930544D05RikJ3QK56 Gm38037-201ENSMUST00000192600 1624 ntBASIC14.77□□□□□ -0.05
4930544D05RikJ3QK56 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
4930544D05RikJ3QK56 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
4930544D05RikJ3QK56 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
4930544D05RikJ3QK56 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
4930544D05RikJ3QK56 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
4930544D05RikJ3QK56 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.76□□□□□ -0.05
4930544D05RikJ3QK56 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
4930544D05RikJ3QK56 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
4930544D05RikJ3QK56 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
4930544D05RikJ3QK56 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
4930544D05RikJ3QK56 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
4930544D05RikJ3QK56 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
4930544D05RikJ3QK56 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
4930544D05RikJ3QK56 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
4930544D05RikJ3QK56 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
4930544D05RikJ3QK56 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
4930544D05RikJ3QK56 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC14.76□□□□□ -0.05
4930544D05RikJ3QK56 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
4930544D05RikJ3QK56 Gm28760-201ENSMUST00000185995 736 ntBASIC14.76□□□□□ -0.05
4930544D05RikJ3QK56 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
4930544D05RikJ3QK56 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC14.76□□□□□ -0.05
4930544D05RikJ3QK56 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
4930544D05RikJ3QK56 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC14.76□□□□□ -0.05
4930544D05RikJ3QK56 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC14.76□□□□□ -0.05
4930544D05RikJ3QK56 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
4930544D05RikJ3QK56 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
4930544D05RikJ3QK56 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
4930544D05RikJ3QK56 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
4930544D05RikJ3QK56 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
4930544D05RikJ3QK56 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
4930544D05RikJ3QK56 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
4930544D05RikJ3QK56 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
4930544D05RikJ3QK56 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
4930544D05RikJ3QK56 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC14.76□□□□□ -0.05
4930544D05RikJ3QK56 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
4930544D05RikJ3QK56 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
4930544D05RikJ3QK56 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
4930544D05RikJ3QK56 Gm20632-201ENSMUST00000176760 2427 ntBASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms