Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Gm12887B1AVM1 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Gm12887B1AVM1 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC11.19□□□□□ -0.62
Gm12887B1AVM1 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Gm12887B1AVM1 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Gm12887B1AVM1 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Gm12887B1AVM1 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC11.19□□□□□ -0.62
Gm12887B1AVM1 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Gm12887B1AVM1 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Gm12887B1AVM1 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Gm12887B1AVM1 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Gm12887B1AVM1 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Gm12887B1AVM1 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Gm12887B1AVM1 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC11.18□□□□□ -0.62
Gm12887B1AVM1 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC11.18□□□□□ -0.62
Gm12887B1AVM1 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Gm12887B1AVM1 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Gm12887B1AVM1 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Gm12887B1AVM1 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Gm12887B1AVM1 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Gm12887B1AVM1 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Gm12887B1AVM1 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Gm12887B1AVM1 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Gm12887B1AVM1 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Gm12887B1AVM1 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Gm12887B1AVM1 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Gm12887B1AVM1 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Gm12887B1AVM1 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC11.18□□□□□ -0.62
Gm12887B1AVM1 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC11.18□□□□□ -0.62
Gm12887B1AVM1 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Gm12887B1AVM1 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Gm12887B1AVM1 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Gm12887B1AVM1 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Gm12887B1AVM1 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Gm12887B1AVM1 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC11.18□□□□□ -0.62
Gm12887B1AVM1 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Gm12887B1AVM1 Gm16198-201ENSMUST00000118766 670 ntBASIC11.18□□□□□ -0.62
Gm12887B1AVM1 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC11.18□□□□□ -0.62
Gm12887B1AVM1 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC11.18□□□□□ -0.62
Gm12887B1AVM1 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Gm12887B1AVM1 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC11.18□□□□□ -0.62
Gm12887B1AVM1 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Gm12887B1AVM1 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC11.18□□□□□ -0.62
Gm12887B1AVM1 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC11.18□□□□□ -0.62
Gm12887B1AVM1 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Gm12887B1AVM1 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Gm12887B1AVM1 AC123645.1-201ENSMUST00000228469 605 ntBASIC11.18□□□□□ -0.62
Gm12887B1AVM1 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Gm12887B1AVM1 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Gm12887B1AVM1 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Gm12887B1AVM1 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Gm12887B1AVM1 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC11.18□□□□□ -0.62
Gm12887B1AVM1 Gm45242-201ENSMUST00000210666 2129 ntBASIC11.18□□□□□ -0.62
Gm12887B1AVM1 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Gm12887B1AVM1 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Gm12887B1AVM1 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Gm12887B1AVM1 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC11.18□□□□□ -0.62
Gm12887B1AVM1 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Gm12887B1AVM1 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Gm12887B1AVM1 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Gm12887B1AVM1 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Gm12887B1AVM1 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Gm12887B1AVM1 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Gm12887B1AVM1 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Gm12887B1AVM1 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Gm12887B1AVM1 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Gm12887B1AVM1 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Gm12887B1AVM1 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Gm12887B1AVM1 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Gm12887B1AVM1 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Gm12887B1AVM1 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC11.17□□□□□ -0.62
Gm12887B1AVM1 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Gm12887B1AVM1 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Gm12887B1AVM1 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Gm12887B1AVM1 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Gm12887B1AVM1 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Gm12887B1AVM1 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Gm12887B1AVM1 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC11.17□□□□□ -0.62
Gm12887B1AVM1 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Gm12887B1AVM1 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC11.17□□□□□ -0.62
Gm12887B1AVM1 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Gm12887B1AVM1 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC11.17□□□□□ -0.62
Gm12887B1AVM1 Klk2-ps-201ENSMUST00000205342 571 ntBASIC11.17□□□□□ -0.62
Gm12887B1AVM1 AC131709.1-201ENSMUST00000224731 1180 ntBASIC11.17□□□□□ -0.62
Gm12887B1AVM1 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Gm12887B1AVM1 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Gm12887B1AVM1 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Gm12887B1AVM1 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Gm12887B1AVM1 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Gm12887B1AVM1 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC11.17□□□□□ -0.62
Gm12887B1AVM1 AC154725.1-201ENSMUST00000224826 1961 ntBASIC11.17□□□□□ -0.62
Gm12887B1AVM1 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Gm12887B1AVM1 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Gm12887B1AVM1 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Gm12887B1AVM1 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Gm12887B1AVM1 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Gm12887B1AVM1 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Gm12887B1AVM1 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Gm12887B1AVM1 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Gm12887B1AVM1 AC117194.1-201ENSMUST00000224847 3002 ntBASIC11.17□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms