Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC13.94□□□□□ -0.18
Col4a6B1AVK5 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Col4a6B1AVK5 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Col4a6B1AVK5 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col4a6B1AVK5 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col4a6B1AVK5 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col4a6B1AVK5 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Col4a6B1AVK5 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col4a6B1AVK5 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC13.93□□□□□ -0.18
Col4a6B1AVK5 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Col4a6B1AVK5 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col4a6B1AVK5 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Col4a6B1AVK5 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col4a6B1AVK5 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col4a6B1AVK5 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Col4a6B1AVK5 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col4a6B1AVK5 Gm24830-201ENSMUST00000102024 166 ntBASIC13.93□□□□□ -0.18
Col4a6B1AVK5 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC13.93□□□□□ -0.18
Col4a6B1AVK5 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col4a6B1AVK5 Gm25890-201ENSMUST00000177643 165 ntBASIC13.93□□□□□ -0.18
Col4a6B1AVK5 Rnu1b2-201ENSMUST00000178073 165 ntBASIC13.93□□□□□ -0.18
Col4a6B1AVK5 Rnu1b1-201ENSMUST00000178250 165 ntBASIC13.93□□□□□ -0.18
Col4a6B1AVK5 Gm22614-201ENSMUST00000178300 165 ntBASIC13.93□□□□□ -0.18
Col4a6B1AVK5 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC13.93□□□□□ -0.18
Col4a6B1AVK5 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC13.93□□□□□ -0.18
Col4a6B1AVK5 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Col4a6B1AVK5 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC13.93□□□□□ -0.18
Col4a6B1AVK5 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC13.93□□□□□ -0.18
Col4a6B1AVK5 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col4a6B1AVK5 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col4a6B1AVK5 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Col4a6B1AVK5 Gm22042-201ENSMUST00000082989 165 ntBASIC13.93□□□□□ -0.18
Col4a6B1AVK5 Gm26232-201ENSMUST00000083360 166 ntBASIC13.93□□□□□ -0.18
Col4a6B1AVK5 Gm24136-201ENSMUST00000083374 165 ntBASIC13.93□□□□□ -0.18
Col4a6B1AVK5 Rnu1b6-201ENSMUST00000083839 166 ntBASIC13.93□□□□□ -0.18
Col4a6B1AVK5 Gm26110-201ENSMUST00000083971 165 ntBASIC13.93□□□□□ -0.18
Col4a6B1AVK5 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC13.93□□□□□ -0.18
Col4a6B1AVK5 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Col4a6B1AVK5 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col4a6B1AVK5 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Col4a6B1AVK5 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col4a6B1AVK5 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col4a6B1AVK5 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC13.93□□□□□ -0.18
Col4a6B1AVK5 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC13.93□□□□□ -0.18
Col4a6B1AVK5 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
Col4a6B1AVK5 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col4a6B1AVK5 AC101945.2-201ENSMUST00000227886 1377 ntBASIC13.93□□□□□ -0.18
Col4a6B1AVK5 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col4a6B1AVK5 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col4a6B1AVK5 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col4a6B1AVK5 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col4a6B1AVK5 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Col4a6B1AVK5 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col4a6B1AVK5 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Col4a6B1AVK5 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC13.92□□□□□ -0.18
Col4a6B1AVK5 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col4a6B1AVK5 AC069562.3-201ENSMUST00000225387 587 ntBASIC13.92□□□□□ -0.18
Col4a6B1AVK5 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col4a6B1AVK5 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Col4a6B1AVK5 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Col4a6B1AVK5 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col4a6B1AVK5 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col4a6B1AVK5 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Col4a6B1AVK5 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Col4a6B1AVK5 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Col4a6B1AVK5 Gm6015-201ENSMUST00000217493 1586 ntBASIC13.92□□□□□ -0.18
Col4a6B1AVK5 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col4a6B1AVK5 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col4a6B1AVK5 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
Col4a6B1AVK5 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col4a6B1AVK5 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col4a6B1AVK5 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col4a6B1AVK5 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col4a6B1AVK5 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col4a6B1AVK5 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.92□□□□□ -0.18
Col4a6B1AVK5 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col4a6B1AVK5 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col4a6B1AVK5 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col4a6B1AVK5 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC13.91□□□□□ -0.18
Col4a6B1AVK5 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col4a6B1AVK5 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col4a6B1AVK5 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC13.91□□□□□ -0.18
Col4a6B1AVK5 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Col4a6B1AVK5 CT030182.1-201ENSMUST00000225935 533 ntBASIC13.91□□□□□ -0.18
Col4a6B1AVK5 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col4a6B1AVK5 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col4a6B1AVK5 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Col4a6B1AVK5 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
Col4a6B1AVK5 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC13.91□□□□□ -0.18
Col4a6B1AVK5 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.91□□□□□ -0.18
Col4a6B1AVK5 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col4a6B1AVK5 Gm43205-201ENSMUST00000198622 1968 ntBASIC13.91□□□□□ -0.18
Col4a6B1AVK5 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Col4a6B1AVK5 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col4a6B1AVK5 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col4a6B1AVK5 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.91□□□□□ -0.18
Col4a6B1AVK5 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Col4a6B1AVK5 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Col4a6B1AVK5 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col4a6B1AVK5 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms