Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Chd6A3KFM7 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC11.08□□□□□ -0.64
Chd6A3KFM7 Gm34023-201ENSMUST00000195539 217 ntBASIC11.08□□□□□ -0.64
Chd6A3KFM7 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Chd6A3KFM7 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chd6A3KFM7 Spink2-201ENSMUST00000065216 631 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chd6A3KFM7 Gm13271-201ENSMUST00000094992 549 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Chd6A3KFM7 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chd6A3KFM7 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chd6A3KFM7 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chd6A3KFM7 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chd6A3KFM7 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Chd6A3KFM7 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chd6A3KFM7 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Chd6A3KFM7 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC11.08□□□□□ -0.64
Chd6A3KFM7 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chd6A3KFM7 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chd6A3KFM7 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC11.08□□□□□ -0.64
Chd6A3KFM7 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Chd6A3KFM7 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC11.08□□□□□ -0.64
Chd6A3KFM7 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Chd6A3KFM7 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chd6A3KFM7 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Chd6A3KFM7 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC11.08□□□□□ -0.64
Chd6A3KFM7 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chd6A3KFM7 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Chd6A3KFM7 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Chd6A3KFM7 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC11.08□□□□□ -0.64
Chd6A3KFM7 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC11.08□□□□□ -0.64
Chd6A3KFM7 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC11.08□□□□□ -0.64
Chd6A3KFM7 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Chd6A3KFM7 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chd6A3KFM7 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chd6A3KFM7 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Chd6A3KFM7 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC11.07□□□□□ -0.64
Chd6A3KFM7 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC11.07□□□□□ -0.64
Chd6A3KFM7 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC11.07□□□□□ -0.64
Chd6A3KFM7 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC11.07□□□□□ -0.64
Chd6A3KFM7 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Chd6A3KFM7 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC11.07□□□□□ -0.64
Chd6A3KFM7 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chd6A3KFM7 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chd6A3KFM7 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chd6A3KFM7 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Chd6A3KFM7 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC11.07□□□□□ -0.64
Chd6A3KFM7 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chd6A3KFM7 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Chd6A3KFM7 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chd6A3KFM7 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Chd6A3KFM7 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chd6A3KFM7 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Chd6A3KFM7 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC11.07□□□□□ -0.64
Chd6A3KFM7 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Chd6A3KFM7 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Chd6A3KFM7 Gm13730-201ENSMUST00000121036 1462 ntBASIC11.07□□□□□ -0.64
Chd6A3KFM7 Gm31256-201ENSMUST00000194705 506 ntBASIC11.07□□□□□ -0.64
Chd6A3KFM7 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC11.07□□□□□ -0.64
Chd6A3KFM7 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC11.07□□□□□ -0.64
Chd6A3KFM7 AC159819.2-201ENSMUST00000216151 342 ntBASIC11.07□□□□□ -0.64
Chd6A3KFM7 Prrxl1-205ENSMUST00000228878 723 ntBASIC11.07□□□□□ -0.64
Chd6A3KFM7 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chd6A3KFM7 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chd6A3KFM7 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chd6A3KFM7 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chd6A3KFM7 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Chd6A3KFM7 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chd6A3KFM7 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC11.06□□□□□ -0.64
Chd6A3KFM7 4930465M20Rik-201ENSMUST00000130564 1446 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Chd6A3KFM7 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC11.06□□□□□ -0.64
Chd6A3KFM7 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chd6A3KFM7 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chd6A3KFM7 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Chd6A3KFM7 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
Chd6A3KFM7 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Chd6A3KFM7 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chd6A3KFM7 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chd6A3KFM7 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC11.06□□□□□ -0.64
Chd6A3KFM7 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC11.06□□□□□ -0.64
Chd6A3KFM7 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC11.06□□□□□ -0.64
Chd6A3KFM7 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chd6A3KFM7 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chd6A3KFM7 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chd6A3KFM7 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chd6A3KFM7 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Chd6A3KFM7 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Chd6A3KFM7 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC11.06□□□□□ -0.64
Chd6A3KFM7 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chd6A3KFM7 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Chd6A3KFM7 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chd6A3KFM7 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Chd6A3KFM7 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chd6A3KFM7 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chd6A3KFM7 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chd6A3KFM7 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chd6A3KFM7 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Chd6A3KFM7 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC11.06□□□□□ -0.64
Chd6A3KFM7 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chd6A3KFM7 Gm17040-202ENSMUST00000170597 889 ntBASIC11.06□□□□□ -0.64
Chd6A3KFM7 Gm8856-201ENSMUST00000185254 1144 ntBASIC11.06□□□□□ -0.64
Chd6A3KFM7 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms