Protein–RNA interactions for Protein: A0A504

Smim17, MCG116182, isoform CRA_b, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim17A0A504 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smim17A0A504 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC12.51□□□□□ -0.41
Smim17A0A504 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smim17A0A504 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smim17A0A504 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Smim17A0A504 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smim17A0A504 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
Smim17A0A504 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smim17A0A504 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smim17A0A504 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smim17A0A504 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Smim17A0A504 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Smim17A0A504 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smim17A0A504 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smim17A0A504 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smim17A0A504 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Smim17A0A504 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smim17A0A504 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Smim17A0A504 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Smim17A0A504 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smim17A0A504 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smim17A0A504 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smim17A0A504 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC12.5□□□□□ -0.41
Smim17A0A504 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC12.5□□□□□ -0.41
Smim17A0A504 Gm8097-201ENSMUST00000117903 829 ntBASIC12.5□□□□□ -0.41
Smim17A0A504 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Smim17A0A504 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC12.5□□□□□ -0.41
Smim17A0A504 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Smim17A0A504 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Smim17A0A504 Gm18489-201ENSMUST00000172565 551 ntBASIC12.5□□□□□ -0.41
Smim17A0A504 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Smim17A0A504 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC12.5□□□□□ -0.41
Smim17A0A504 AC131690.1-201ENSMUST00000218406 374 ntBASIC12.5□□□□□ -0.41
Smim17A0A504 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smim17A0A504 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Smim17A0A504 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smim17A0A504 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smim17A0A504 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smim17A0A504 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Smim17A0A504 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smim17A0A504 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smim17A0A504 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.5□□□□□ -0.41
Smim17A0A504 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Smim17A0A504 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Smim17A0A504 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.5□□□□□ -0.41
Smim17A0A504 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC12.5□□□□□ -0.41
Smim17A0A504 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smim17A0A504 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smim17A0A504 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Smim17A0A504 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Smim17A0A504 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Smim17A0A504 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smim17A0A504 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.5□□□□□ -0.41
Smim17A0A504 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smim17A0A504 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smim17A0A504 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smim17A0A504 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Smim17A0A504 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smim17A0A504 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smim17A0A504 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Smim17A0A504 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smim17A0A504 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smim17A0A504 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Smim17A0A504 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Smim17A0A504 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smim17A0A504 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smim17A0A504 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Smim17A0A504 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smim17A0A504 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.49□□□□□ -0.41
Smim17A0A504 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Smim17A0A504 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC12.49□□□□□ -0.41
Smim17A0A504 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smim17A0A504 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smim17A0A504 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smim17A0A504 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smim17A0A504 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Smim17A0A504 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smim17A0A504 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Smim17A0A504 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smim17A0A504 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smim17A0A504 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smim17A0A504 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smim17A0A504 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smim17A0A504 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Smim17A0A504 Gm11185-201ENSMUST00000117732 1007 ntBASIC12.49□□□□□ -0.41
Smim17A0A504 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC12.49□□□□□ -0.41
Smim17A0A504 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC12.49□□□□□ -0.41
Smim17A0A504 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Smim17A0A504 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC12.49□□□□□ -0.41
Smim17A0A504 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Smim17A0A504 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Smim17A0A504 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smim17A0A504 AC108846.1-201ENSMUST00000214531 513 ntBASIC12.49□□□□□ -0.41
Smim17A0A504 Gm9182-201ENSMUST00000217829 639 ntBASIC12.49□□□□□ -0.41
Smim17A0A504 AC151836.1-202ENSMUST00000226259 753 ntBASIC12.49□□□□□ -0.41
Smim17A0A504 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smim17A0A504 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Smim17A0A504 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smim17A0A504 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Smim17A0A504 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms