Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Gm8396-201ENSMUST00000057361 823 ntBASIC10.08□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC10.08□□□□□ -0.8
Trav9n-2A0A0G2JDP3 AC166491.1-201ENSMUST00000227053 2308 ntBASIC10.08□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav9n-2A0A0G2JDP3 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Fgf17-202ENSMUST00000227123 1336 ntBASIC10.07□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC10.07□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC10.07□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
Trav9n-2A0A0G2JDP3 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC10.07□□□□□ -0.8
Trav9n-2A0A0G2JDP3 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC10.07□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC10.07□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Ighv1-25-201ENSMUST00000195638 345 ntBASIC10.07□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC10.07□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Gm6916-202ENSMUST00000205523 195 ntBASIC10.07□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Gm16476-201ENSMUST00000221544 139 ntBASIC10.07□□□□□ -0.8
Trav9n-2A0A0G2JDP3 AC121804.3-201ENSMUST00000223420 295 ntBASIC10.07□□□□□ -0.8
Trav9n-2A0A0G2JDP3 AC139350.3-201ENSMUST00000226151 420 ntBASIC10.07□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav9n-2A0A0G2JDP3 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC10.07□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav9n-2A0A0G2JDP3 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC10.07□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Gm30238-201ENSMUST00000195528 2603 ntBASIC10.07□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav9n-2A0A0G2JDP3 AC154767.3-201ENSMUST00000225150 1342 ntBASIC10.07□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC10.06□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC10.06□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Gm15889-202ENSMUST00000212669 2443 ntBASIC10.06□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC10.06□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC10.06□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms