Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC11.61□□□□□ -0.55
Trav5-4A0A075B652 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav5-4A0A075B652 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav5-4A0A075B652 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav5-4A0A075B652 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Trav5-4A0A075B652 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav5-4A0A075B652 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav5-4A0A075B652 AC166491.1-201ENSMUST00000227053 2308 ntBASIC11.61□□□□□ -0.55
Trav5-4A0A075B652 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav5-4A0A075B652 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav5-4A0A075B652 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC11.61□□□□□ -0.55
Trav5-4A0A075B652 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav5-4A0A075B652 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Trav5-4A0A075B652 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav5-4A0A075B652 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC11.61□□□□□ -0.55
Trav5-4A0A075B652 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav5-4A0A075B652 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Trav5-4A0A075B652 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav5-4A0A075B652 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav5-4A0A075B652 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav5-4A0A075B652 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
Trav5-4A0A075B652 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav5-4A0A075B652 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Trav5-4A0A075B652 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Trav5-4A0A075B652 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav5-4A0A075B652 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav5-4A0A075B652 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav5-4A0A075B652 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC11.6□□□□□ -0.55
Trav5-4A0A075B652 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav5-4A0A075B652 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav5-4A0A075B652 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav5-4A0A075B652 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC11.6□□□□□ -0.55
Trav5-4A0A075B652 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav5-4A0A075B652 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Trav5-4A0A075B652 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav5-4A0A075B652 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav5-4A0A075B652 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav5-4A0A075B652 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav5-4A0A075B652 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Trav5-4A0A075B652 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav5-4A0A075B652 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav5-4A0A075B652 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav5-4A0A075B652 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav5-4A0A075B652 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Trav5-4A0A075B652 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav5-4A0A075B652 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav5-4A0A075B652 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Trav5-4A0A075B652 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Trav5-4A0A075B652 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav5-4A0A075B652 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC11.6□□□□□ -0.55
Trav5-4A0A075B652 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC11.6□□□□□ -0.55
Trav5-4A0A075B652 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC11.6□□□□□ -0.55
Trav5-4A0A075B652 Gm8116-201ENSMUST00000182917 1201 ntBASIC11.6□□□□□ -0.55
Trav5-4A0A075B652 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC11.6□□□□□ -0.55
Trav5-4A0A075B652 AC225888.1-201ENSMUST00000227184 728 ntBASIC11.6□□□□□ -0.55
Trav5-4A0A075B652 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav5-4A0A075B652 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav5-4A0A075B652 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav5-4A0A075B652 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav5-4A0A075B652 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav5-4A0A075B652 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav5-4A0A075B652 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav5-4A0A075B652 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Trav5-4A0A075B652 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav5-4A0A075B652 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav5-4A0A075B652 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav5-4A0A075B652 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Trav5-4A0A075B652 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav5-4A0A075B652 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav5-4A0A075B652 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav5-4A0A075B652 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav5-4A0A075B652 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav5-4A0A075B652 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Trav5-4A0A075B652 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav5-4A0A075B652 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav5-4A0A075B652 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav5-4A0A075B652 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav5-4A0A075B652 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC11.6□□□□□ -0.55
Trav5-4A0A075B652 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav5-4A0A075B652 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav5-4A0A075B652 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav5-4A0A075B652 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav5-4A0A075B652 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC11.59□□□□□ -0.55
Trav5-4A0A075B652 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav5-4A0A075B652 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav5-4A0A075B652 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav5-4A0A075B652 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Trav5-4A0A075B652 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav5-4A0A075B652 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Trav5-4A0A075B652 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav5-4A0A075B652 Gm5648-201ENSMUST00000122244 1587 ntBASIC11.59□□□□□ -0.55
Trav5-4A0A075B652 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav5-4A0A075B652 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Trav5-4A0A075B652 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav5-4A0A075B652 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC11.59□□□□□ -0.55
Trav5-4A0A075B652 Gm15957-201ENSMUST00000118893 974 ntBASIC11.59□□□□□ -0.55
Trav5-4A0A075B652 Gm6222-201ENSMUST00000120787 396 ntBASIC11.59□□□□□ -0.55
Trav5-4A0A075B652 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav5-4A0A075B652 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav5-4A0A075B652 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms