Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav7n-4A0A075B620 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trav7n-4A0A075B620 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Trav7n-4A0A075B620 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trav7n-4A0A075B620 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trav7n-4A0A075B620 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav7n-4A0A075B620 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav7n-4A0A075B620 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Trav7n-4A0A075B620 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav7n-4A0A075B620 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav7n-4A0A075B620 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav7n-4A0A075B620 Gm43463-201ENSMUST00000195967 1803 ntBASIC10.45□□□□□ -0.74
Trav7n-4A0A075B620 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav7n-4A0A075B620 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC10.45□□□□□ -0.74
Trav7n-4A0A075B620 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav7n-4A0A075B620 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC10.45□□□□□ -0.74
Trav7n-4A0A075B620 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Trav7n-4A0A075B620 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav7n-4A0A075B620 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Trav7n-4A0A075B620 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trav7n-4A0A075B620 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Trav7n-4A0A075B620 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Trav7n-4A0A075B620 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
Trav7n-4A0A075B620 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Trav7n-4A0A075B620 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
Trav7n-4A0A075B620 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav7n-4A0A075B620 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Trav7n-4A0A075B620 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC10.45□□□□□ -0.74
Trav7n-4A0A075B620 Gm43332-201ENSMUST00000202511 1044 ntBASIC10.45□□□□□ -0.74
Trav7n-4A0A075B620 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Trav7n-4A0A075B620 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav7n-4A0A075B620 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav7n-4A0A075B620 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav7n-4A0A075B620 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav7n-4A0A075B620 Spr-ps1-201ENSMUST00000089584 605 ntBASIC10.45□□□□□ -0.74
Trav7n-4A0A075B620 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav7n-4A0A075B620 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav7n-4A0A075B620 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav7n-4A0A075B620 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC10.45□□□□□ -0.74
Trav7n-4A0A075B620 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav7n-4A0A075B620 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav7n-4A0A075B620 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav7n-4A0A075B620 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav7n-4A0A075B620 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav7n-4A0A075B620 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav7n-4A0A075B620 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav7n-4A0A075B620 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav7n-4A0A075B620 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
Trav7n-4A0A075B620 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav7n-4A0A075B620 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav7n-4A0A075B620 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav7n-4A0A075B620 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trav7n-4A0A075B620 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav7n-4A0A075B620 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav7n-4A0A075B620 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC10.44□□□□□ -0.74
Trav7n-4A0A075B620 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Trav7n-4A0A075B620 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav7n-4A0A075B620 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trav7n-4A0A075B620 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav7n-4A0A075B620 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav7n-4A0A075B620 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav7n-4A0A075B620 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav7n-4A0A075B620 Gm8775-201ENSMUST00000170943 1327 ntBASIC10.44□□□□□ -0.74
Trav7n-4A0A075B620 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC10.44□□□□□ -0.74
Trav7n-4A0A075B620 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC10.44□□□□□ -0.74
Trav7n-4A0A075B620 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav7n-4A0A075B620 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trav7n-4A0A075B620 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC10.44□□□□□ -0.74
Trav7n-4A0A075B620 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC10.44□□□□□ -0.74
Trav7n-4A0A075B620 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trav7n-4A0A075B620 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trav7n-4A0A075B620 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trav7n-4A0A075B620 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trav7n-4A0A075B620 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC10.44□□□□□ -0.74
Trav7n-4A0A075B620 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC10.44□□□□□ -0.74
Trav7n-4A0A075B620 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC10.44□□□□□ -0.74
Trav7n-4A0A075B620 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav7n-4A0A075B620 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav7n-4A0A075B620 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav7n-4A0A075B620 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Trav7n-4A0A075B620 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav7n-4A0A075B620 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav7n-4A0A075B620 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Trav7n-4A0A075B620 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trav7n-4A0A075B620 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav7n-4A0A075B620 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav7n-4A0A075B620 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav7n-4A0A075B620 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC10.44□□□□□ -0.74
Trav7n-4A0A075B620 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Trav7n-4A0A075B620 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav7n-4A0A075B620 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC10.44□□□□□ -0.74
Trav7n-4A0A075B620 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav7n-4A0A075B620 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav7n-4A0A075B620 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav7n-4A0A075B620 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Trav7n-4A0A075B620 Gm26616-202ENSMUST00000195676 3107 ntBASIC10.44□□□□□ -0.74
Trav7n-4A0A075B620 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav7n-4A0A075B620 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav7n-4A0A075B620 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav7n-4A0A075B620 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms