Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
H2afb2S4R1M3 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
H2afb2S4R1M3 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
H2afb2S4R1M3 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
H2afb2S4R1M3 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
H2afb2S4R1M3 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.87□□□□□ -0.19
H2afb2S4R1M3 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
H2afb2S4R1M3 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
H2afb2S4R1M3 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
H2afb2S4R1M3 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
H2afb2S4R1M3 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
H2afb2S4R1M3 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
H2afb2S4R1M3 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
H2afb2S4R1M3 Gm6283-201ENSMUST00000182369 1000 ntBASIC13.87□□□□□ -0.19
H2afb2S4R1M3 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC13.87□□□□□ -0.19
H2afb2S4R1M3 AC139382.1-201ENSMUST00000221402 498 ntBASIC13.87□□□□□ -0.19
H2afb2S4R1M3 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
H2afb2S4R1M3 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC13.87□□□□□ -0.19
H2afb2S4R1M3 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
H2afb2S4R1M3 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
H2afb2S4R1M3 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
H2afb2S4R1M3 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
H2afb2S4R1M3 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
H2afb2S4R1M3 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.87□□□□□ -0.19
H2afb2S4R1M3 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
H2afb2S4R1M3 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
H2afb2S4R1M3 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
H2afb2S4R1M3 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
H2afb2S4R1M3 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
H2afb2S4R1M3 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
H2afb2S4R1M3 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
H2afb2S4R1M3 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
H2afb2S4R1M3 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
H2afb2S4R1M3 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
H2afb2S4R1M3 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
H2afb2S4R1M3 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
H2afb2S4R1M3 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
H2afb2S4R1M3 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC13.86□□□□□ -0.19
H2afb2S4R1M3 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
H2afb2S4R1M3 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
H2afb2S4R1M3 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
H2afb2S4R1M3 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
H2afb2S4R1M3 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
H2afb2S4R1M3 Gm7820-201ENSMUST00000121012 1052 ntBASIC13.86□□□□□ -0.19
H2afb2S4R1M3 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC13.86□□□□□ -0.19
H2afb2S4R1M3 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
H2afb2S4R1M3 Gm3436-201ENSMUST00000179930 840 ntBASIC13.86□□□□□ -0.19
H2afb2S4R1M3 Gm27680-201ENSMUST00000184192 160 ntBASIC13.86□□□□□ -0.19
H2afb2S4R1M3 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
H2afb2S4R1M3 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
H2afb2S4R1M3 Mir497b-201ENSMUST00000093601 125 ntBASIC13.86□□□□□ -0.19
H2afb2S4R1M3 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
H2afb2S4R1M3 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
H2afb2S4R1M3 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
H2afb2S4R1M3 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
H2afb2S4R1M3 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
H2afb2S4R1M3 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
H2afb2S4R1M3 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
H2afb2S4R1M3 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
H2afb2S4R1M3 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC13.86□□□□□ -0.19
H2afb2S4R1M3 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
H2afb2S4R1M3 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
H2afb2S4R1M3 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
H2afb2S4R1M3 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
H2afb2S4R1M3 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
H2afb2S4R1M3 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC13.85□□□□□ -0.19
H2afb2S4R1M3 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.85□□□□□ -0.19
H2afb2S4R1M3 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
H2afb2S4R1M3 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
H2afb2S4R1M3 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
H2afb2S4R1M3 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
H2afb2S4R1M3 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
H2afb2S4R1M3 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
H2afb2S4R1M3 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
H2afb2S4R1M3 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
H2afb2S4R1M3 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
H2afb2S4R1M3 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
H2afb2S4R1M3 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
H2afb2S4R1M3 Mir698-201ENSMUST00000102164 109 ntBASIC13.85□□□□□ -0.19
H2afb2S4R1M3 Gm12585-201ENSMUST00000117307 290 ntBASIC13.85□□□□□ -0.19
H2afb2S4R1M3 Gm13453-201ENSMUST00000118708 357 ntBASIC13.85□□□□□ -0.19
H2afb2S4R1M3 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC13.85□□□□□ -0.19
H2afb2S4R1M3 Gm4804-201ENSMUST00000182234 999 ntBASIC13.85□□□□□ -0.19
H2afb2S4R1M3 Gm27321-201ENSMUST00000185021 205 ntBASIC13.85□□□□□ -0.19
H2afb2S4R1M3 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC13.85□□□□□ -0.19
H2afb2S4R1M3 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
H2afb2S4R1M3 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
H2afb2S4R1M3 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
H2afb2S4R1M3 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
H2afb2S4R1M3 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
H2afb2S4R1M3 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
H2afb2S4R1M3 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
H2afb2S4R1M3 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
H2afb2S4R1M3 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
H2afb2S4R1M3 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
H2afb2S4R1M3 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
H2afb2S4R1M3 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
H2afb2S4R1M3 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
H2afb2S4R1M3 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
H2afb2S4R1M3 Gm8337-201ENSMUST00000187358 1938 ntBASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms