Protein–RNA interactions for Protein: Q9Z2V5

Hdac6, Histone deacetylase 6, mousemouse

Predictions only

Length 1,149 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac6Q9Z2V5 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Hdac6Q9Z2V5 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Hdac6Q9Z2V5 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC17.24■□□□□ 0.35
Hdac6Q9Z2V5 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hdac6Q9Z2V5 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC17.24■□□□□ 0.35
Hdac6Q9Z2V5 Gm44064-201ENSMUST00000204964 1087 ntBASIC17.24■□□□□ 0.35
Hdac6Q9Z2V5 Gm6334-201ENSMUST00000207083 228 ntBASIC17.24■□□□□ 0.35
Hdac6Q9Z2V5 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC17.24■□□□□ 0.35
Hdac6Q9Z2V5 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Hdac6Q9Z2V5 Gm4935-201ENSMUST00000221316 1198 ntBASIC17.24■□□□□ 0.35
Hdac6Q9Z2V5 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Hdac6Q9Z2V5 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Hdac6Q9Z2V5 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Hdac6Q9Z2V5 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hdac6Q9Z2V5 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC17.24■□□□□ 0.35
Hdac6Q9Z2V5 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hdac6Q9Z2V5 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
Hdac6Q9Z2V5 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Hdac6Q9Z2V5 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hdac6Q9Z2V5 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hdac6Q9Z2V5 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hdac6Q9Z2V5 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hdac6Q9Z2V5 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hdac6Q9Z2V5 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Hdac6Q9Z2V5 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hdac6Q9Z2V5 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hdac6Q9Z2V5 Gm9856-201ENSMUST00000217077 2578 ntBASIC17.23■□□□□ 0.35
Hdac6Q9Z2V5 Gm14350-201ENSMUST00000116642 640 ntBASIC17.23■□□□□ 0.35
Hdac6Q9Z2V5 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Hdac6Q9Z2V5 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC17.23■□□□□ 0.35
Hdac6Q9Z2V5 Gm29396-201ENSMUST00000185659 716 ntBASIC17.23■□□□□ 0.35
Hdac6Q9Z2V5 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC17.23■□□□□ 0.35
Hdac6Q9Z2V5 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC17.23■□□□□ 0.35
Hdac6Q9Z2V5 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC17.23■□□□□ 0.35
Hdac6Q9Z2V5 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Hdac6Q9Z2V5 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hdac6Q9Z2V5 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hdac6Q9Z2V5 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Hdac6Q9Z2V5 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hdac6Q9Z2V5 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hdac6Q9Z2V5 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hdac6Q9Z2V5 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Hdac6Q9Z2V5 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
Hdac6Q9Z2V5 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hdac6Q9Z2V5 Gm6203-201ENSMUST00000209575 1342 ntBASIC17.22■□□□□ 0.35
Hdac6Q9Z2V5 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Hdac6Q9Z2V5 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC17.22■□□□□ 0.35
Hdac6Q9Z2V5 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hdac6Q9Z2V5 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Hdac6Q9Z2V5 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hdac6Q9Z2V5 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hdac6Q9Z2V5 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hdac6Q9Z2V5 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hdac6Q9Z2V5 Gm12020-201ENSMUST00000119030 2042 ntBASIC17.22■□□□□ 0.35
Hdac6Q9Z2V5 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Hdac6Q9Z2V5 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hdac6Q9Z2V5 Gm12241-201ENSMUST00000118330 726 ntBASIC17.22■□□□□ 0.35
Hdac6Q9Z2V5 Gm15808-201ENSMUST00000119046 604 ntBASIC17.22■□□□□ 0.35
Hdac6Q9Z2V5 Gm13123-201ENSMUST00000122173 492 ntBASIC17.22■□□□□ 0.35
Hdac6Q9Z2V5 Gm13786-201ENSMUST00000122371 333 ntBASIC17.22■□□□□ 0.35
Hdac6Q9Z2V5 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Hdac6Q9Z2V5 Gm7895-201ENSMUST00000187459 1173 ntBASIC17.22■□□□□ 0.35
Hdac6Q9Z2V5 Gm37259-201ENSMUST00000193903 849 ntBASIC17.22■□□□□ 0.35
Hdac6Q9Z2V5 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hdac6Q9Z2V5 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hdac6Q9Z2V5 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC17.22■□□□□ 0.35
Hdac6Q9Z2V5 Gm16372-201ENSMUST00000073088 450 ntBASIC17.22■□□□□ 0.35
Hdac6Q9Z2V5 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Hdac6Q9Z2V5 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hdac6Q9Z2V5 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hdac6Q9Z2V5 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hdac6Q9Z2V5 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Hdac6Q9Z2V5 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC17.21■□□□□ 0.35
Hdac6Q9Z2V5 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hdac6Q9Z2V5 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Hdac6Q9Z2V5 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Hdac6Q9Z2V5 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hdac6Q9Z2V5 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Hdac6Q9Z2V5 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hdac6Q9Z2V5 AC162938.1-201ENSMUST00000213140 2323 ntBASIC17.21■□□□□ 0.35
Hdac6Q9Z2V5 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Hdac6Q9Z2V5 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hdac6Q9Z2V5 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Hdac6Q9Z2V5 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hdac6Q9Z2V5 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC17.21■□□□□ 0.35
Hdac6Q9Z2V5 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hdac6Q9Z2V5 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Hdac6Q9Z2V5 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Hdac6Q9Z2V5 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC17.21■□□□□ 0.35
Hdac6Q9Z2V5 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC17.21■□□□□ 0.35
Hdac6Q9Z2V5 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC17.21■□□□□ 0.35
Hdac6Q9Z2V5 Gm26083-201ENSMUST00000157904 193 ntBASIC17.21■□□□□ 0.35
Hdac6Q9Z2V5 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC17.21■□□□□ 0.35
Hdac6Q9Z2V5 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC17.21■□□□□ 0.35
Hdac6Q9Z2V5 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC17.21■□□□□ 0.35
Hdac6Q9Z2V5 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hdac6Q9Z2V5 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Hdac6Q9Z2V5 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hdac6Q9Z2V5 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC17.21■□□□□ 0.35
Hdac6Q9Z2V5 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms