Protein–RNA interactions for Protein: Q9Z2L7

Crlf3, Cytokine receptor-like factor 3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf3Q9Z2L7 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Crlf3Q9Z2L7 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Crlf3Q9Z2L7 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
Crlf3Q9Z2L7 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Crlf3Q9Z2L7 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Crlf3Q9Z2L7 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.16
Crlf3Q9Z2L7 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Crlf3Q9Z2L7 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Crlf3Q9Z2L7 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Crlf3Q9Z2L7 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Crlf3Q9Z2L7 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Crlf3Q9Z2L7 Gm9347-201ENSMUST00000211473 1607 ntBASIC14.02□□□□□ -0.16
Crlf3Q9Z2L7 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Crlf3Q9Z2L7 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Crlf3Q9Z2L7 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Crlf3Q9Z2L7 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC14.02□□□□□ -0.17
Crlf3Q9Z2L7 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Crlf3Q9Z2L7 Gm4913-201ENSMUST00000117075 1290 ntBASIC14.02□□□□□ -0.17
Crlf3Q9Z2L7 H2af-ps-201ENSMUST00000119066 295 ntBASIC14.02□□□□□ -0.17
Crlf3Q9Z2L7 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
Crlf3Q9Z2L7 Thap2-203ENSMUST00000218989 527 ntBASIC14.02□□□□□ -0.17
Crlf3Q9Z2L7 Ndufaf2-202ENSMUST00000223734 556 ntBASIC14.02□□□□□ -0.17
Crlf3Q9Z2L7 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Crlf3Q9Z2L7 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Crlf3Q9Z2L7 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
Crlf3Q9Z2L7 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Crlf3Q9Z2L7 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
Crlf3Q9Z2L7 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Crlf3Q9Z2L7 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.17
Crlf3Q9Z2L7 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Crlf3Q9Z2L7 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Crlf3Q9Z2L7 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Crlf3Q9Z2L7 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Crlf3Q9Z2L7 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Crlf3Q9Z2L7 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Crlf3Q9Z2L7 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Crlf3Q9Z2L7 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Crlf3Q9Z2L7 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Crlf3Q9Z2L7 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC14.01□□□□□ -0.17
Crlf3Q9Z2L7 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Crlf3Q9Z2L7 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Crlf3Q9Z2L7 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
Crlf3Q9Z2L7 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Crlf3Q9Z2L7 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Crlf3Q9Z2L7 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC14.01□□□□□ -0.17
Crlf3Q9Z2L7 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Crlf3Q9Z2L7 Mir7036b-201ENSMUST00000184791 63 ntBASIC14.01□□□□□ -0.17
Crlf3Q9Z2L7 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Crlf3Q9Z2L7 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC14.01□□□□□ -0.17
Crlf3Q9Z2L7 AC123645.1-201ENSMUST00000228469 605 ntBASIC14.01□□□□□ -0.17
Crlf3Q9Z2L7 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Crlf3Q9Z2L7 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Crlf3Q9Z2L7 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Crlf3Q9Z2L7 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Crlf3Q9Z2L7 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Crlf3Q9Z2L7 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Crlf3Q9Z2L7 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Crlf3Q9Z2L7 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Crlf3Q9Z2L7 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Crlf3Q9Z2L7 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Crlf3Q9Z2L7 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Crlf3Q9Z2L7 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Crlf3Q9Z2L7 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Crlf3Q9Z2L7 Gm5648-201ENSMUST00000122244 1587 ntBASIC14□□□□□ -0.17
Crlf3Q9Z2L7 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
Crlf3Q9Z2L7 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Crlf3Q9Z2L7 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Crlf3Q9Z2L7 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC14□□□□□ -0.17
Crlf3Q9Z2L7 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Crlf3Q9Z2L7 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Crlf3Q9Z2L7 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Crlf3Q9Z2L7 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC14□□□□□ -0.17
Crlf3Q9Z2L7 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Crlf3Q9Z2L7 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Crlf3Q9Z2L7 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Crlf3Q9Z2L7 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Crlf3Q9Z2L7 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Crlf3Q9Z2L7 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC14□□□□□ -0.17
Crlf3Q9Z2L7 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC14□□□□□ -0.17
Crlf3Q9Z2L7 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC14□□□□□ -0.17
Crlf3Q9Z2L7 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC14□□□□□ -0.17
Crlf3Q9Z2L7 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC14□□□□□ -0.17
Crlf3Q9Z2L7 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Crlf3Q9Z2L7 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Crlf3Q9Z2L7 Gm25925-201ENSMUST00000158314 306 ntBASIC14□□□□□ -0.17
Crlf3Q9Z2L7 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Crlf3Q9Z2L7 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Crlf3Q9Z2L7 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Crlf3Q9Z2L7 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC14□□□□□ -0.17
Crlf3Q9Z2L7 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Crlf3Q9Z2L7 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Crlf3Q9Z2L7 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Crlf3Q9Z2L7 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Crlf3Q9Z2L7 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Crlf3Q9Z2L7 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Crlf3Q9Z2L7 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Crlf3Q9Z2L7 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Crlf3Q9Z2L7 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Crlf3Q9Z2L7 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Crlf3Q9Z2L7 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms