Protein–RNA interactions for Protein: Q9WU22

Ptpn4, Tyrosine-protein phosphatase non-receptor type 4, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpn4Q9WU22 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ptpn4Q9WU22 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ptpn4Q9WU22 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ptpn4Q9WU22 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC13.67□□□□□ -0.22
Ptpn4Q9WU22 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Ptpn4Q9WU22 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ptpn4Q9WU22 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ptpn4Q9WU22 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Ptpn4Q9WU22 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
Ptpn4Q9WU22 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC13.66□□□□□ -0.22
Ptpn4Q9WU22 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ptpn4Q9WU22 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ptpn4Q9WU22 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ptpn4Q9WU22 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ptpn4Q9WU22 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ptpn4Q9WU22 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ptpn4Q9WU22 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ptpn4Q9WU22 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC13.66□□□□□ -0.22
Ptpn4Q9WU22 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ptpn4Q9WU22 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ptpn4Q9WU22 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ptpn4Q9WU22 Mir3113-201ENSMUST00000175478 76 ntBASIC13.66□□□□□ -0.22
Ptpn4Q9WU22 Gm27300-201ENSMUST00000184085 97 ntBASIC13.66□□□□□ -0.22
Ptpn4Q9WU22 Gm27702-201ENSMUST00000184512 56 ntBASIC13.66□□□□□ -0.22
Ptpn4Q9WU22 Gm27335-201ENSMUST00000184758 97 ntBASIC13.66□□□□□ -0.22
Ptpn4Q9WU22 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ptpn4Q9WU22 Gm8597-201ENSMUST00000191525 1109 ntBASIC13.66□□□□□ -0.22
Ptpn4Q9WU22 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC13.66□□□□□ -0.22
Ptpn4Q9WU22 AC174742.1-201ENSMUST00000218272 304 ntBASIC13.66□□□□□ -0.22
Ptpn4Q9WU22 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ptpn4Q9WU22 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ptpn4Q9WU22 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ptpn4Q9WU22 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ptpn4Q9WU22 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ptpn4Q9WU22 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ptpn4Q9WU22 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ptpn4Q9WU22 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ptpn4Q9WU22 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ptpn4Q9WU22 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ptpn4Q9WU22 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ptpn4Q9WU22 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ptpn4Q9WU22 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ptpn4Q9WU22 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Ptpn4Q9WU22 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Ptpn4Q9WU22 Gm27194-201ENSMUST00000175753 2936 ntBASIC13.66□□□□□ -0.22
Ptpn4Q9WU22 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ptpn4Q9WU22 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Ptpn4Q9WU22 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ptpn4Q9WU22 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Ptpn4Q9WU22 AC119177.1-201ENSMUST00000227647 1332 ntBASIC13.65□□□□□ -0.22
Ptpn4Q9WU22 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ptpn4Q9WU22 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ptpn4Q9WU22 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Ptpn4Q9WU22 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.65□□□□□ -0.22
Ptpn4Q9WU22 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ptpn4Q9WU22 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ptpn4Q9WU22 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Ptpn4Q9WU22 Gm28386-201ENSMUST00000189147 1849 ntBASIC13.65□□□□□ -0.22
Ptpn4Q9WU22 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.65□□□□□ -0.22
Ptpn4Q9WU22 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ptpn4Q9WU22 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ptpn4Q9WU22 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Ptpn4Q9WU22 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Ptpn4Q9WU22 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC13.65□□□□□ -0.22
Ptpn4Q9WU22 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC13.65□□□□□ -0.22
Ptpn4Q9WU22 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC13.65□□□□□ -0.22
Ptpn4Q9WU22 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ptpn4Q9WU22 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC13.65□□□□□ -0.22
Ptpn4Q9WU22 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ptpn4Q9WU22 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC13.65□□□□□ -0.22
Ptpn4Q9WU22 Gm24513-201ENSMUST00000174964 138 ntBASIC13.65□□□□□ -0.22
Ptpn4Q9WU22 Gm27397-201ENSMUST00000184997 107 ntBASIC13.65□□□□□ -0.22
Ptpn4Q9WU22 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ptpn4Q9WU22 AC225888.1-201ENSMUST00000227184 728 ntBASIC13.65□□□□□ -0.22
Ptpn4Q9WU22 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Ptpn4Q9WU22 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ptpn4Q9WU22 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ptpn4Q9WU22 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ptpn4Q9WU22 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ptpn4Q9WU22 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ptpn4Q9WU22 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ptpn4Q9WU22 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ptpn4Q9WU22 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.23
Ptpn4Q9WU22 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13.65□□□□□ -0.23
Ptpn4Q9WU22 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.23
Ptpn4Q9WU22 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.23
Ptpn4Q9WU22 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ptpn4Q9WU22 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ptpn4Q9WU22 Gm42748-201ENSMUST00000199354 2341 ntBASIC13.64□□□□□ -0.23
Ptpn4Q9WU22 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
Ptpn4Q9WU22 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ptpn4Q9WU22 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ptpn4Q9WU22 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.64□□□□□ -0.23
Ptpn4Q9WU22 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ptpn4Q9WU22 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ptpn4Q9WU22 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ptpn4Q9WU22 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ptpn4Q9WU22 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Ptpn4Q9WU22 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ptpn4Q9WU22 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms