Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Upk3aQ9JKX8 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Upk3aQ9JKX8 Ldb3-207ENSMUST00000227819 1499 ntBASIC13.31□□□□□ -0.28
Upk3aQ9JKX8 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Upk3aQ9JKX8 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Upk3aQ9JKX8 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Upk3aQ9JKX8 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Upk3aQ9JKX8 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Upk3aQ9JKX8 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Upk3aQ9JKX8 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Upk3aQ9JKX8 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC13.31□□□□□ -0.28
Upk3aQ9JKX8 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC13.31□□□□□ -0.28
Upk3aQ9JKX8 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Upk3aQ9JKX8 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Upk3aQ9JKX8 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Upk3aQ9JKX8 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Upk3aQ9JKX8 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Upk3aQ9JKX8 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Upk3aQ9JKX8 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Upk3aQ9JKX8 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Upk3aQ9JKX8 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Upk3aQ9JKX8 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Upk3aQ9JKX8 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Upk3aQ9JKX8 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
Upk3aQ9JKX8 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Upk3aQ9JKX8 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Upk3aQ9JKX8 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Upk3aQ9JKX8 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Upk3aQ9JKX8 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Upk3aQ9JKX8 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.3□□□□□ -0.28
Upk3aQ9JKX8 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Upk3aQ9JKX8 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Upk3aQ9JKX8 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Upk3aQ9JKX8 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Upk3aQ9JKX8 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Upk3aQ9JKX8 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Upk3aQ9JKX8 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Upk3aQ9JKX8 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Upk3aQ9JKX8 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Upk3aQ9JKX8 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Upk3aQ9JKX8 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Upk3aQ9JKX8 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Upk3aQ9JKX8 Syt7-205ENSMUST00000224135 1557 ntBASIC13.3□□□□□ -0.28
Upk3aQ9JKX8 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.3□□□□□ -0.28
Upk3aQ9JKX8 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Upk3aQ9JKX8 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC13.3□□□□□ -0.28
Upk3aQ9JKX8 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Upk3aQ9JKX8 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Upk3aQ9JKX8 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC13.3□□□□□ -0.28
Upk3aQ9JKX8 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC13.3□□□□□ -0.28
Upk3aQ9JKX8 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Upk3aQ9JKX8 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC13.3□□□□□ -0.28
Upk3aQ9JKX8 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Upk3aQ9JKX8 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Upk3aQ9JKX8 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Upk3aQ9JKX8 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Upk3aQ9JKX8 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
Upk3aQ9JKX8 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Upk3aQ9JKX8 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Upk3aQ9JKX8 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Upk3aQ9JKX8 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Upk3aQ9JKX8 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC13.29□□□□□ -0.28
Upk3aQ9JKX8 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
Upk3aQ9JKX8 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Upk3aQ9JKX8 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Upk3aQ9JKX8 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC13.29□□□□□ -0.28
Upk3aQ9JKX8 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Upk3aQ9JKX8 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Upk3aQ9JKX8 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Upk3aQ9JKX8 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Upk3aQ9JKX8 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Upk3aQ9JKX8 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Upk3aQ9JKX8 Gm7488-201ENSMUST00000117148 684 ntBASIC13.29□□□□□ -0.28
Upk3aQ9JKX8 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Upk3aQ9JKX8 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC13.29□□□□□ -0.28
Upk3aQ9JKX8 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Upk3aQ9JKX8 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Upk3aQ9JKX8 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Upk3aQ9JKX8 Gm43094-201ENSMUST00000196549 921 ntBASIC13.29□□□□□ -0.28
Upk3aQ9JKX8 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Upk3aQ9JKX8 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Upk3aQ9JKX8 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Upk3aQ9JKX8 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Upk3aQ9JKX8 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Upk3aQ9JKX8 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Upk3aQ9JKX8 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Upk3aQ9JKX8 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC13.29□□□□□ -0.28
Upk3aQ9JKX8 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Upk3aQ9JKX8 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Upk3aQ9JKX8 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Upk3aQ9JKX8 Gm20632-201ENSMUST00000176760 2427 ntBASIC13.29□□□□□ -0.28
Upk3aQ9JKX8 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Upk3aQ9JKX8 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC13.29□□□□□ -0.28
Upk3aQ9JKX8 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Upk3aQ9JKX8 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Upk3aQ9JKX8 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Upk3aQ9JKX8 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Upk3aQ9JKX8 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Upk3aQ9JKX8 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Upk3aQ9JKX8 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms