Protein–RNA interactions for Protein: Q9JIG4

Ppp1r3f, Protein phosphatase 1 regulatory subunit 3F, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp1r3fQ9JIG4 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ppp1r3fQ9JIG4 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC17.56■□□□□ 0.4
Ppp1r3fQ9JIG4 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ppp1r3fQ9JIG4 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ppp1r3fQ9JIG4 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ppp1r3fQ9JIG4 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ppp1r3fQ9JIG4 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ppp1r3fQ9JIG4 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Ppp1r3fQ9JIG4 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ppp1r3fQ9JIG4 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ppp1r3fQ9JIG4 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ppp1r3fQ9JIG4 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC17.55■□□□□ 0.4
Ppp1r3fQ9JIG4 Gm42872-201ENSMUST00000200026 1967 ntBASIC17.55■□□□□ 0.4
Ppp1r3fQ9JIG4 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC17.55■□□□□ 0.4
Ppp1r3fQ9JIG4 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ppp1r3fQ9JIG4 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Ppp1r3fQ9JIG4 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ppp1r3fQ9JIG4 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ppp1r3fQ9JIG4 AC114543.1-201ENSMUST00000226451 1558 ntBASIC17.55■□□□□ 0.4
Ppp1r3fQ9JIG4 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ppp1r3fQ9JIG4 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC17.55■□□□□ 0.4
Ppp1r3fQ9JIG4 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ppp1r3fQ9JIG4 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ppp1r3fQ9JIG4 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC17.55■□□□□ 0.4
Ppp1r3fQ9JIG4 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ppp1r3fQ9JIG4 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC17.55■□□□□ 0.4
Ppp1r3fQ9JIG4 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ppp1r3fQ9JIG4 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ppp1r3fQ9JIG4 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ppp1r3fQ9JIG4 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC17.55■□□□□ 0.4
Ppp1r3fQ9JIG4 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC17.55■□□□□ 0.4
Ppp1r3fQ9JIG4 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ppp1r3fQ9JIG4 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Ppp1r3fQ9JIG4 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ppp1r3fQ9JIG4 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ppp1r3fQ9JIG4 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Ppp1r3fQ9JIG4 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ppp1r3fQ9JIG4 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC17.54■□□□□ 0.4
Ppp1r3fQ9JIG4 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ppp1r3fQ9JIG4 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC17.54■□□□□ 0.4
Ppp1r3fQ9JIG4 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Ppp1r3fQ9JIG4 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC17.54■□□□□ 0.4
Ppp1r3fQ9JIG4 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ppp1r3fQ9JIG4 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ppp1r3fQ9JIG4 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Ppp1r3fQ9JIG4 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ppp1r3fQ9JIG4 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ppp1r3fQ9JIG4 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
Ppp1r3fQ9JIG4 Gm13392-201ENSMUST00000117708 150 ntBASIC17.54■□□□□ 0.4
Ppp1r3fQ9JIG4 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC17.54■□□□□ 0.4
Ppp1r3fQ9JIG4 AC238811.3-201ENSMUST00000225422 709 ntBASIC17.54■□□□□ 0.4
Ppp1r3fQ9JIG4 AC154846.1-201ENSMUST00000226278 862 ntBASIC17.54■□□□□ 0.4
Ppp1r3fQ9JIG4 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Ppp1r3fQ9JIG4 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ppp1r3fQ9JIG4 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Ppp1r3fQ9JIG4 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ppp1r3fQ9JIG4 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ppp1r3fQ9JIG4 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ppp1r3fQ9JIG4 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Ppp1r3fQ9JIG4 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ppp1r3fQ9JIG4 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ppp1r3fQ9JIG4 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Ppp1r3fQ9JIG4 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ppp1r3fQ9JIG4 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ppp1r3fQ9JIG4 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ppp1r3fQ9JIG4 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Ppp1r3fQ9JIG4 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ppp1r3fQ9JIG4 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC17.53■□□□□ 0.4
Ppp1r3fQ9JIG4 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Ppp1r3fQ9JIG4 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC17.53■□□□□ 0.4
Ppp1r3fQ9JIG4 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
Ppp1r3fQ9JIG4 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ppp1r3fQ9JIG4 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ppp1r3fQ9JIG4 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC17.53■□□□□ 0.4
Ppp1r3fQ9JIG4 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC17.53■□□□□ 0.4
Ppp1r3fQ9JIG4 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ppp1r3fQ9JIG4 AC154171.1-201ENSMUST00000224610 643 ntBASIC17.53■□□□□ 0.4
Ppp1r3fQ9JIG4 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Ppp1r3fQ9JIG4 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Ppp1r3fQ9JIG4 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ppp1r3fQ9JIG4 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ppp1r3fQ9JIG4 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ppp1r3fQ9JIG4 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ppp1r3fQ9JIG4 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ppp1r3fQ9JIG4 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ppp1r3fQ9JIG4 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ppp1r3fQ9JIG4 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ppp1r3fQ9JIG4 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Ppp1r3fQ9JIG4 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ppp1r3fQ9JIG4 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ppp1r3fQ9JIG4 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ppp1r3fQ9JIG4 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ppp1r3fQ9JIG4 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Ppp1r3fQ9JIG4 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Ppp1r3fQ9JIG4 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ppp1r3fQ9JIG4 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ppp1r3fQ9JIG4 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ppp1r3fQ9JIG4 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ppp1r3fQ9JIG4 Gm5303-201ENSMUST00000117943 1252 ntBASIC17.52■□□□□ 0.4
Ppp1r3fQ9JIG4 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms