Protein–RNA interactions for Protein: Q9DC33

Hmg20a, High mobility group protein 20A, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20aQ9DC33 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Hmg20aQ9DC33 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Hmg20aQ9DC33 Gm7977-201ENSMUST00000193787 748 ntBASIC12.65□□□□□ -0.38
Hmg20aQ9DC33 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC12.65□□□□□ -0.38
Hmg20aQ9DC33 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hmg20aQ9DC33 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hmg20aQ9DC33 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hmg20aQ9DC33 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC12.65□□□□□ -0.38
Hmg20aQ9DC33 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Hmg20aQ9DC33 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hmg20aQ9DC33 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Hmg20aQ9DC33 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hmg20aQ9DC33 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hmg20aQ9DC33 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Hmg20aQ9DC33 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hmg20aQ9DC33 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Hmg20aQ9DC33 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC12.65□□□□□ -0.38
Hmg20aQ9DC33 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Hmg20aQ9DC33 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Hmg20aQ9DC33 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
Hmg20aQ9DC33 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.39
Hmg20aQ9DC33 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Hmg20aQ9DC33 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.64□□□□□ -0.39
Hmg20aQ9DC33 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hmg20aQ9DC33 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hmg20aQ9DC33 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hmg20aQ9DC33 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hmg20aQ9DC33 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hmg20aQ9DC33 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hmg20aQ9DC33 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Hmg20aQ9DC33 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hmg20aQ9DC33 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hmg20aQ9DC33 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hmg20aQ9DC33 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hmg20aQ9DC33 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hmg20aQ9DC33 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hmg20aQ9DC33 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.64□□□□□ -0.39
Hmg20aQ9DC33 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hmg20aQ9DC33 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Hmg20aQ9DC33 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Hmg20aQ9DC33 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC12.64□□□□□ -0.39
Hmg20aQ9DC33 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Hmg20aQ9DC33 Gm37584-201ENSMUST00000193595 1290 ntBASIC12.64□□□□□ -0.39
Hmg20aQ9DC33 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC12.64□□□□□ -0.39
Hmg20aQ9DC33 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hmg20aQ9DC33 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.64□□□□□ -0.39
Hmg20aQ9DC33 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Hmg20aQ9DC33 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
Hmg20aQ9DC33 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Hmg20aQ9DC33 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Hmg20aQ9DC33 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Hmg20aQ9DC33 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hmg20aQ9DC33 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hmg20aQ9DC33 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hmg20aQ9DC33 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.64□□□□□ -0.39
Hmg20aQ9DC33 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hmg20aQ9DC33 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Hmg20aQ9DC33 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hmg20aQ9DC33 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Hmg20aQ9DC33 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hmg20aQ9DC33 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hmg20aQ9DC33 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hmg20aQ9DC33 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hmg20aQ9DC33 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hmg20aQ9DC33 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hmg20aQ9DC33 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hmg20aQ9DC33 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hmg20aQ9DC33 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hmg20aQ9DC33 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hmg20aQ9DC33 Gm11453-201ENSMUST00000117318 1007 ntBASIC12.63□□□□□ -0.39
Hmg20aQ9DC33 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hmg20aQ9DC33 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC12.63□□□□□ -0.39
Hmg20aQ9DC33 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hmg20aQ9DC33 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hmg20aQ9DC33 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hmg20aQ9DC33 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC12.63□□□□□ -0.39
Hmg20aQ9DC33 Rbfox2-207ENSMUST00000227533 1041 ntBASIC12.63□□□□□ -0.39
Hmg20aQ9DC33 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC12.63□□□□□ -0.39
Hmg20aQ9DC33 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hmg20aQ9DC33 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hmg20aQ9DC33 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hmg20aQ9DC33 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC12.63□□□□□ -0.39
Hmg20aQ9DC33 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hmg20aQ9DC33 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hmg20aQ9DC33 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hmg20aQ9DC33 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hmg20aQ9DC33 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hmg20aQ9DC33 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC12.63□□□□□ -0.39
Hmg20aQ9DC33 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hmg20aQ9DC33 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hmg20aQ9DC33 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hmg20aQ9DC33 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hmg20aQ9DC33 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hmg20aQ9DC33 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hmg20aQ9DC33 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Hmg20aQ9DC33 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Hmg20aQ9DC33 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hmg20aQ9DC33 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hmg20aQ9DC33 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.62□□□□□ -0.39
Hmg20aQ9DC33 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms