Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
U2af1Q9D883 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
U2af1Q9D883 AC168058.1-201ENSMUST00000219521 2282 ntBASIC18.2■□□□□ 0.5
U2af1Q9D883 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC18.2■□□□□ 0.5
U2af1Q9D883 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
U2af1Q9D883 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC18.2■□□□□ 0.5
U2af1Q9D883 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
U2af1Q9D883 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
U2af1Q9D883 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
U2af1Q9D883 Gm28182-201ENSMUST00000188354 2477 ntBASIC18.2■□□□□ 0.5
U2af1Q9D883 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC18.19■□□□□ 0.5
U2af1Q9D883 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
U2af1Q9D883 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
U2af1Q9D883 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC18.19■□□□□ 0.5
U2af1Q9D883 Gm13859-201ENSMUST00000119936 1423 ntBASIC18.19■□□□□ 0.5
U2af1Q9D883 Gm15376-201ENSMUST00000122258 783 ntBASIC18.19■□□□□ 0.5
U2af1Q9D883 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC18.19■□□□□ 0.5
U2af1Q9D883 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC18.19■□□□□ 0.5
U2af1Q9D883 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
U2af1Q9D883 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
U2af1Q9D883 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC18.19■□□□□ 0.5
U2af1Q9D883 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
U2af1Q9D883 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
U2af1Q9D883 Gm5745-201ENSMUST00000183748 313 ntBASIC18.19■□□□□ 0.5
U2af1Q9D883 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
U2af1Q9D883 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC18.19■□□□□ 0.5
U2af1Q9D883 AC155258.1-201ENSMUST00000219303 253 ntBASIC18.19■□□□□ 0.5
U2af1Q9D883 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC18.19■□□□□ 0.5
U2af1Q9D883 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
U2af1Q9D883 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
U2af1Q9D883 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
U2af1Q9D883 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
U2af1Q9D883 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
U2af1Q9D883 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
U2af1Q9D883 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
U2af1Q9D883 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
U2af1Q9D883 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
U2af1Q9D883 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
U2af1Q9D883 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
U2af1Q9D883 AC161252.3-201ENSMUST00000225465 1549 ntBASIC18.18■□□□□ 0.5
U2af1Q9D883 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
U2af1Q9D883 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
U2af1Q9D883 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC18.18■□□□□ 0.5
U2af1Q9D883 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
U2af1Q9D883 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
U2af1Q9D883 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC18.18■□□□□ 0.5
U2af1Q9D883 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
U2af1Q9D883 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
U2af1Q9D883 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
U2af1Q9D883 Gm12138-201ENSMUST00000122180 951 ntBASIC18.18■□□□□ 0.5
U2af1Q9D883 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
U2af1Q9D883 Gm19078-201ENSMUST00000206311 727 ntBASIC18.18■□□□□ 0.5
U2af1Q9D883 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
U2af1Q9D883 Gm7653-201ENSMUST00000214567 508 ntBASIC18.18■□□□□ 0.5
U2af1Q9D883 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
U2af1Q9D883 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
U2af1Q9D883 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC18.18■□□□□ 0.5
U2af1Q9D883 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
U2af1Q9D883 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
U2af1Q9D883 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
U2af1Q9D883 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC18.18■□□□□ 0.5
U2af1Q9D883 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
U2af1Q9D883 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
U2af1Q9D883 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
U2af1Q9D883 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
U2af1Q9D883 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
U2af1Q9D883 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
U2af1Q9D883 Gm9115-201ENSMUST00000120192 1348 ntBASIC18.18■□□□□ 0.5
U2af1Q9D883 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
U2af1Q9D883 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
U2af1Q9D883 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
U2af1Q9D883 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
U2af1Q9D883 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
U2af1Q9D883 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
U2af1Q9D883 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
U2af1Q9D883 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
U2af1Q9D883 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
U2af1Q9D883 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
U2af1Q9D883 Gm15889-202ENSMUST00000212669 2443 ntBASIC18.17■□□□□ 0.5
U2af1Q9D883 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
U2af1Q9D883 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
U2af1Q9D883 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC18.17■□□□□ 0.5
U2af1Q9D883 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
U2af1Q9D883 Gm27772-201ENSMUST00000184900 187 ntBASIC18.17■□□□□ 0.5
U2af1Q9D883 Gm7558-201ENSMUST00000193221 1165 ntBASIC18.17■□□□□ 0.5
U2af1Q9D883 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC18.17■□□□□ 0.5
U2af1Q9D883 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
U2af1Q9D883 AC156560.2-201ENSMUST00000221232 264 ntBASIC18.17■□□□□ 0.5
U2af1Q9D883 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
U2af1Q9D883 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC18.17■□□□□ 0.5
U2af1Q9D883 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
U2af1Q9D883 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
U2af1Q9D883 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
U2af1Q9D883 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
U2af1Q9D883 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
U2af1Q9D883 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
U2af1Q9D883 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
U2af1Q9D883 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
U2af1Q9D883 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
U2af1Q9D883 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms