Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Stag1Q9D3E6 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Stag1Q9D3E6 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Stag1Q9D3E6 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Stag1Q9D3E6 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Stag1Q9D3E6 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC16.47■□□□□ 0.23
Stag1Q9D3E6 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC16.47■□□□□ 0.23
Stag1Q9D3E6 Gm38223-201ENSMUST00000194484 695 ntBASIC16.47■□□□□ 0.23
Stag1Q9D3E6 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Stag1Q9D3E6 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC16.47■□□□□ 0.23
Stag1Q9D3E6 Gm7561-201ENSMUST00000211203 886 ntBASIC16.47■□□□□ 0.23
Stag1Q9D3E6 AC166349.1-201ENSMUST00000220866 695 ntBASIC16.47■□□□□ 0.23
Stag1Q9D3E6 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Stag1Q9D3E6 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Stag1Q9D3E6 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Stag1Q9D3E6 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Stag1Q9D3E6 Gm10710-201ENSMUST00000047876 3971 ntBASIC16.47■□□□□ 0.23
Stag1Q9D3E6 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC16.47■□□□□ 0.23
Stag1Q9D3E6 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Stag1Q9D3E6 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Stag1Q9D3E6 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Stag1Q9D3E6 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Stag1Q9D3E6 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
Stag1Q9D3E6 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Stag1Q9D3E6 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC16.46■□□□□ 0.23
Stag1Q9D3E6 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Stag1Q9D3E6 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Stag1Q9D3E6 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Stag1Q9D3E6 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Stag1Q9D3E6 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Stag1Q9D3E6 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Stag1Q9D3E6 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC16.46■□□□□ 0.23
Stag1Q9D3E6 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Stag1Q9D3E6 Gm44397-201ENSMUST00000195950 113 ntBASIC16.46■□□□□ 0.23
Stag1Q9D3E6 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC16.46■□□□□ 0.23
Stag1Q9D3E6 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
Stag1Q9D3E6 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Stag1Q9D3E6 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Stag1Q9D3E6 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Stag1Q9D3E6 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Stag1Q9D3E6 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Stag1Q9D3E6 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Stag1Q9D3E6 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Stag1Q9D3E6 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Stag1Q9D3E6 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Stag1Q9D3E6 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC16.46■□□□□ 0.22
Stag1Q9D3E6 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Stag1Q9D3E6 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Stag1Q9D3E6 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Stag1Q9D3E6 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Stag1Q9D3E6 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC16.45■□□□□ 0.22
Stag1Q9D3E6 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Stag1Q9D3E6 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Stag1Q9D3E6 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Stag1Q9D3E6 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Stag1Q9D3E6 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Stag1Q9D3E6 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Stag1Q9D3E6 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Stag1Q9D3E6 Gm27847-201ENSMUST00000183711 107 ntBASIC16.45■□□□□ 0.22
Stag1Q9D3E6 Gm27375-201ENSMUST00000183799 107 ntBASIC16.45■□□□□ 0.22
Stag1Q9D3E6 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC16.45■□□□□ 0.22
Stag1Q9D3E6 Gm38230-201ENSMUST00000193572 1159 ntBASIC16.45■□□□□ 0.22
Stag1Q9D3E6 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Stag1Q9D3E6 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Stag1Q9D3E6 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Stag1Q9D3E6 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Stag1Q9D3E6 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Stag1Q9D3E6 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Stag1Q9D3E6 AC131068.2-201ENSMUST00000226175 1453 ntBASIC16.45■□□□□ 0.22
Stag1Q9D3E6 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Stag1Q9D3E6 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Stag1Q9D3E6 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Stag1Q9D3E6 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC16.45■□□□□ 0.22
Stag1Q9D3E6 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Stag1Q9D3E6 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Stag1Q9D3E6 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Stag1Q9D3E6 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Stag1Q9D3E6 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Stag1Q9D3E6 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Stag1Q9D3E6 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC16.44■□□□□ 0.22
Stag1Q9D3E6 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Stag1Q9D3E6 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Stag1Q9D3E6 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Stag1Q9D3E6 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Stag1Q9D3E6 Zscan30-202ENSMUST00000224144 1458 ntBASIC16.44■□□□□ 0.22
Stag1Q9D3E6 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Stag1Q9D3E6 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Stag1Q9D3E6 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Stag1Q9D3E6 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Stag1Q9D3E6 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Stag1Q9D3E6 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC16.44■□□□□ 0.22
Stag1Q9D3E6 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Stag1Q9D3E6 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Stag1Q9D3E6 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC16.44■□□□□ 0.22
Stag1Q9D3E6 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC16.44■□□□□ 0.22
Stag1Q9D3E6 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Stag1Q9D3E6 Gm5161-201ENSMUST00000075243 853 ntBASIC16.44■□□□□ 0.22
Stag1Q9D3E6 Gm10012-201ENSMUST00000078252 192 ntBASIC16.44■□□□□ 0.22
Stag1Q9D3E6 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Stag1Q9D3E6 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms