Protein–RNA interactions for Protein: Q9D0N8

Tmem88, Transmembrane protein 88, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem88Q9D0N8 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tmem88Q9D0N8 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Tmem88Q9D0N8 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tmem88Q9D0N8 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Tmem88Q9D0N8 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Tmem88Q9D0N8 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tmem88Q9D0N8 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tmem88Q9D0N8 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tmem88Q9D0N8 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tmem88Q9D0N8 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tmem88Q9D0N8 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tmem88Q9D0N8 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC10.94□□□□□ -0.66
Tmem88Q9D0N8 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tmem88Q9D0N8 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tmem88Q9D0N8 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC10.94□□□□□ -0.66
Tmem88Q9D0N8 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC10.94□□□□□ -0.66
Tmem88Q9D0N8 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Tmem88Q9D0N8 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tmem88Q9D0N8 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tmem88Q9D0N8 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Tmem88Q9D0N8 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tmem88Q9D0N8 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Tmem88Q9D0N8 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Tmem88Q9D0N8 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Tmem88Q9D0N8 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Tmem88Q9D0N8 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tmem88Q9D0N8 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Tmem88Q9D0N8 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tmem88Q9D0N8 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tmem88Q9D0N8 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tmem88Q9D0N8 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC10.94□□□□□ -0.66
Tmem88Q9D0N8 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Tmem88Q9D0N8 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tmem88Q9D0N8 Gm27357-201ENSMUST00000183754 135 ntBASIC10.94□□□□□ -0.66
Tmem88Q9D0N8 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC10.94□□□□□ -0.66
Tmem88Q9D0N8 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Tmem88Q9D0N8 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Tmem88Q9D0N8 AC108846.1-201ENSMUST00000214531 513 ntBASIC10.94□□□□□ -0.66
Tmem88Q9D0N8 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tmem88Q9D0N8 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Tmem88Q9D0N8 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Tmem88Q9D0N8 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Tmem88Q9D0N8 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Tmem88Q9D0N8 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tmem88Q9D0N8 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tmem88Q9D0N8 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tmem88Q9D0N8 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tmem88Q9D0N8 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tmem88Q9D0N8 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tmem88Q9D0N8 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tmem88Q9D0N8 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Tmem88Q9D0N8 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Tmem88Q9D0N8 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tmem88Q9D0N8 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tmem88Q9D0N8 Gm17435-202ENSMUST00000212699 1998 ntBASIC10.94□□□□□ -0.66
Tmem88Q9D0N8 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC10.94□□□□□ -0.66
Tmem88Q9D0N8 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tmem88Q9D0N8 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tmem88Q9D0N8 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tmem88Q9D0N8 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tmem88Q9D0N8 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tmem88Q9D0N8 Gm37269-201ENSMUST00000193906 1891 ntBASIC10.93□□□□□ -0.66
Tmem88Q9D0N8 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tmem88Q9D0N8 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tmem88Q9D0N8 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Tmem88Q9D0N8 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tmem88Q9D0N8 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tmem88Q9D0N8 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tmem88Q9D0N8 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Tmem88Q9D0N8 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tmem88Q9D0N8 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC10.93□□□□□ -0.66
Tmem88Q9D0N8 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Tmem88Q9D0N8 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC10.93□□□□□ -0.66
Tmem88Q9D0N8 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC10.93□□□□□ -0.66
Tmem88Q9D0N8 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tmem88Q9D0N8 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Tmem88Q9D0N8 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC10.93□□□□□ -0.66
Tmem88Q9D0N8 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC10.93□□□□□ -0.66
Tmem88Q9D0N8 AC127349.1-201ENSMUST00000224590 266 ntBASIC10.93□□□□□ -0.66
Tmem88Q9D0N8 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tmem88Q9D0N8 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tmem88Q9D0N8 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tmem88Q9D0N8 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tmem88Q9D0N8 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Tmem88Q9D0N8 Gm13337-201ENSMUST00000119183 1594 ntBASIC10.93□□□□□ -0.66
Tmem88Q9D0N8 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Tmem88Q9D0N8 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tmem88Q9D0N8 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
Tmem88Q9D0N8 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tmem88Q9D0N8 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tmem88Q9D0N8 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tmem88Q9D0N8 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Tmem88Q9D0N8 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tmem88Q9D0N8 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tmem88Q9D0N8 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tmem88Q9D0N8 Gm14752-201ENSMUST00000120719 2075 ntBASIC10.93□□□□□ -0.66
Tmem88Q9D0N8 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tmem88Q9D0N8 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tmem88Q9D0N8 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tmem88Q9D0N8 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms