Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC13.02□□□□□ -0.32
Chaf1bQ9D0N7 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Chaf1bQ9D0N7 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Chaf1bQ9D0N7 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Chaf1bQ9D0N7 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC13.02□□□□□ -0.33
Chaf1bQ9D0N7 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Chaf1bQ9D0N7 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Chaf1bQ9D0N7 Gm13884-201ENSMUST00000118103 829 ntBASIC13.02□□□□□ -0.33
Chaf1bQ9D0N7 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Chaf1bQ9D0N7 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC13.02□□□□□ -0.33
Chaf1bQ9D0N7 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
Chaf1bQ9D0N7 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
Chaf1bQ9D0N7 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Chaf1bQ9D0N7 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC13.02□□□□□ -0.33
Chaf1bQ9D0N7 Gm43332-201ENSMUST00000202511 1044 ntBASIC13.02□□□□□ -0.33
Chaf1bQ9D0N7 AC130671.1-201ENSMUST00000227384 1237 ntBASIC13.02□□□□□ -0.33
Chaf1bQ9D0N7 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Chaf1bQ9D0N7 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Chaf1bQ9D0N7 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Chaf1bQ9D0N7 AC155298.2-201ENSMUST00000225485 6226 ntBASIC13.02□□□□□ -0.33
Chaf1bQ9D0N7 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Chaf1bQ9D0N7 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
Chaf1bQ9D0N7 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Chaf1bQ9D0N7 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Chaf1bQ9D0N7 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Chaf1bQ9D0N7 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
Chaf1bQ9D0N7 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Chaf1bQ9D0N7 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Chaf1bQ9D0N7 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Chaf1bQ9D0N7 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
Chaf1bQ9D0N7 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Chaf1bQ9D0N7 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC13.01□□□□□ -0.33
Chaf1bQ9D0N7 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC13.01□□□□□ -0.33
Chaf1bQ9D0N7 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chaf1bQ9D0N7 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chaf1bQ9D0N7 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chaf1bQ9D0N7 Gm37795-201ENSMUST00000194216 2459 ntBASIC13.01□□□□□ -0.33
Chaf1bQ9D0N7 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Chaf1bQ9D0N7 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chaf1bQ9D0N7 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Chaf1bQ9D0N7 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Chaf1bQ9D0N7 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Chaf1bQ9D0N7 Mir5126-201ENSMUST00000175513 77 ntBASIC13.01□□□□□ -0.33
Chaf1bQ9D0N7 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC13.01□□□□□ -0.33
Chaf1bQ9D0N7 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Chaf1bQ9D0N7 Gm27920-201ENSMUST00000183953 96 ntBASIC13.01□□□□□ -0.33
Chaf1bQ9D0N7 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Chaf1bQ9D0N7 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC13.01□□□□□ -0.33
Chaf1bQ9D0N7 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC13.01□□□□□ -0.33
Chaf1bQ9D0N7 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.01□□□□□ -0.33
Chaf1bQ9D0N7 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chaf1bQ9D0N7 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.01□□□□□ -0.33
Chaf1bQ9D0N7 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chaf1bQ9D0N7 Gm6756-201ENSMUST00000180647 1620 ntBASIC13.01□□□□□ -0.33
Chaf1bQ9D0N7 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Chaf1bQ9D0N7 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC13.01□□□□□ -0.33
Chaf1bQ9D0N7 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Chaf1bQ9D0N7 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chaf1bQ9D0N7 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Chaf1bQ9D0N7 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.01□□□□□ -0.33
Chaf1bQ9D0N7 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chaf1bQ9D0N7 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chaf1bQ9D0N7 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Chaf1bQ9D0N7 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chaf1bQ9D0N7 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Chaf1bQ9D0N7 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Chaf1bQ9D0N7 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Chaf1bQ9D0N7 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Chaf1bQ9D0N7 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC13□□□□□ -0.33
Chaf1bQ9D0N7 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Chaf1bQ9D0N7 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Chaf1bQ9D0N7 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Chaf1bQ9D0N7 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13□□□□□ -0.33
Chaf1bQ9D0N7 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Chaf1bQ9D0N7 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Chaf1bQ9D0N7 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Chaf1bQ9D0N7 AC122901.1-201ENSMUST00000214203 1790 ntBASIC13□□□□□ -0.33
Chaf1bQ9D0N7 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Chaf1bQ9D0N7 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Chaf1bQ9D0N7 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Chaf1bQ9D0N7 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Chaf1bQ9D0N7 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Chaf1bQ9D0N7 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC13□□□□□ -0.33
Chaf1bQ9D0N7 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
Chaf1bQ9D0N7 AC084391.1-201ENSMUST00000200651 141 ntBASIC13□□□□□ -0.33
Chaf1bQ9D0N7 Gm10459-201ENSMUST00000202708 1155 ntBASIC13□□□□□ -0.33
Chaf1bQ9D0N7 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Chaf1bQ9D0N7 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Chaf1bQ9D0N7 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC13□□□□□ -0.33
Chaf1bQ9D0N7 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC13□□□□□ -0.33
Chaf1bQ9D0N7 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC13□□□□□ -0.33
Chaf1bQ9D0N7 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Chaf1bQ9D0N7 Gm9924-202ENSMUST00000192760 2311 ntBASIC13□□□□□ -0.33
Chaf1bQ9D0N7 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13□□□□□ -0.33
Chaf1bQ9D0N7 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Chaf1bQ9D0N7 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Chaf1bQ9D0N7 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13□□□□□ -0.33
Chaf1bQ9D0N7 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Chaf1bQ9D0N7 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Chaf1bQ9D0N7 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms