Protein–RNA interactions for Protein: Q9CZ83

Mrpl55, 39S ribosomal protein L55, mitochondrial, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl55Q9CZ83 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Mrpl55Q9CZ83 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Mrpl55Q9CZ83 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC9.22□□□□□ -0.93
Mrpl55Q9CZ83 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Mrpl55Q9CZ83 Gm13410-201ENSMUST00000117058 1415 ntBASIC9.22□□□□□ -0.93
Mrpl55Q9CZ83 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
Mrpl55Q9CZ83 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Mrpl55Q9CZ83 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Mrpl55Q9CZ83 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Mrpl55Q9CZ83 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Mrpl55Q9CZ83 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Mrpl55Q9CZ83 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.93
Mrpl55Q9CZ83 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.93
Mrpl55Q9CZ83 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.93
Mrpl55Q9CZ83 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC9.21□□□□□ -0.93
Mrpl55Q9CZ83 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Mrpl55Q9CZ83 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Mrpl55Q9CZ83 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Mrpl55Q9CZ83 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Mrpl55Q9CZ83 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC9.21□□□□□ -0.93
Mrpl55Q9CZ83 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC9.21□□□□□ -0.93
Mrpl55Q9CZ83 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Mrpl55Q9CZ83 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Mrpl55Q9CZ83 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.93
Mrpl55Q9CZ83 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Mrpl55Q9CZ83 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Mrpl55Q9CZ83 Gm14701-201ENSMUST00000117156 348 ntBASIC9.21□□□□□ -0.94
Mrpl55Q9CZ83 Gm15427-201ENSMUST00000117288 531 ntBASIC9.21□□□□□ -0.94
Mrpl55Q9CZ83 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC9.21□□□□□ -0.94
Mrpl55Q9CZ83 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC9.21□□□□□ -0.94
Mrpl55Q9CZ83 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC9.21□□□□□ -0.94
Mrpl55Q9CZ83 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC9.21□□□□□ -0.94
Mrpl55Q9CZ83 Gm5177-201ENSMUST00000183092 997 ntBASIC9.21□□□□□ -0.94
Mrpl55Q9CZ83 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Mrpl55Q9CZ83 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Mrpl55Q9CZ83 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Mrpl55Q9CZ83 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC9.21□□□□□ -0.94
Mrpl55Q9CZ83 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Mrpl55Q9CZ83 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Mrpl55Q9CZ83 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC9.21□□□□□ -0.94
Mrpl55Q9CZ83 Gm5184-201ENSMUST00000220417 1702 ntBASIC9.21□□□□□ -0.94
Mrpl55Q9CZ83 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
Mrpl55Q9CZ83 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.94
Mrpl55Q9CZ83 AC119177.1-201ENSMUST00000227647 1332 ntBASIC9.21□□□□□ -0.94
Mrpl55Q9CZ83 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Mrpl55Q9CZ83 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Mrpl55Q9CZ83 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.94
Mrpl55Q9CZ83 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
Mrpl55Q9CZ83 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Mrpl55Q9CZ83 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.94
Mrpl55Q9CZ83 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Mrpl55Q9CZ83 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Mrpl55Q9CZ83 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC9.21□□□□□ -0.94
Mrpl55Q9CZ83 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Mrpl55Q9CZ83 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Mrpl55Q9CZ83 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Mrpl55Q9CZ83 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Mrpl55Q9CZ83 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Mrpl55Q9CZ83 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Mrpl55Q9CZ83 Gm44065-201ENSMUST00000203184 3527 ntBASIC9.21□□□□□ -0.94
Mrpl55Q9CZ83 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC9.21□□□□□ -0.94
Mrpl55Q9CZ83 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
Mrpl55Q9CZ83 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Mrpl55Q9CZ83 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Mrpl55Q9CZ83 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Mrpl55Q9CZ83 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Mrpl55Q9CZ83 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
Mrpl55Q9CZ83 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Mrpl55Q9CZ83 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Mrpl55Q9CZ83 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
Mrpl55Q9CZ83 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Mrpl55Q9CZ83 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Mrpl55Q9CZ83 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Mrpl55Q9CZ83 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Mrpl55Q9CZ83 Nrn1-204ENSMUST00000224323 1779 ntBASIC9.2□□□□□ -0.94
Mrpl55Q9CZ83 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC9.2□□□□□ -0.94
Mrpl55Q9CZ83 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Mrpl55Q9CZ83 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Mrpl55Q9CZ83 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Mrpl55Q9CZ83 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
Mrpl55Q9CZ83 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Mrpl55Q9CZ83 Gm13597-201ENSMUST00000121239 375 ntBASIC9.2□□□□□ -0.94
Mrpl55Q9CZ83 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC9.2□□□□□ -0.94
Mrpl55Q9CZ83 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Mrpl55Q9CZ83 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC9.2□□□□□ -0.94
Mrpl55Q9CZ83 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
Mrpl55Q9CZ83 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC9.2□□□□□ -0.94
Mrpl55Q9CZ83 Gm7556-201ENSMUST00000201178 1084 ntBASIC9.2□□□□□ -0.94
Mrpl55Q9CZ83 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Mrpl55Q9CZ83 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC9.2□□□□□ -0.94
Mrpl55Q9CZ83 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Mrpl55Q9CZ83 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Mrpl55Q9CZ83 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC9.2□□□□□ -0.94
Mrpl55Q9CZ83 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
Mrpl55Q9CZ83 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Mrpl55Q9CZ83 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Mrpl55Q9CZ83 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC9.2□□□□□ -0.94
Mrpl55Q9CZ83 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Mrpl55Q9CZ83 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Mrpl55Q9CZ83 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms