Protein–RNA interactions for Protein: Q9CYI0

Protein Njmu-R1, mousemouse

Predictions only

Length 393 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CYI0 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Q9CYI0 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC15.32■□□□□ 0.04
Q9CYI0 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC15.32■□□□□ 0.04
Q9CYI0 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Q9CYI0 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Q9CYI0 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Q9CYI0 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Q9CYI0 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Q9CYI0 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Q9CYI0 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Q9CYI0 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC15.32■□□□□ 0.04
Q9CYI0 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Q9CYI0 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Q9CYI0 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC15.32■□□□□ 0.04
Q9CYI0 AC159196.2-201ENSMUST00000224082 1622 ntBASIC15.32■□□□□ 0.04
Q9CYI0 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Q9CYI0 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Q9CYI0 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Q9CYI0 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Q9CYI0 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Q9CYI0 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Q9CYI0 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Q9CYI0 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Q9CYI0 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Q9CYI0 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Q9CYI0 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Q9CYI0 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Q9CYI0 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Q9CYI0 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Q9CYI0 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Q9CYI0 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Q9CYI0 Gm15806-201ENSMUST00000120696 955 ntBASIC15.31■□□□□ 0.04
Q9CYI0 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Q9CYI0 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Q9CYI0 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Q9CYI0 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC15.31■□□□□ 0.04
Q9CYI0 Gm3809-201ENSMUST00000180973 1006 ntBASIC15.31■□□□□ 0.04
Q9CYI0 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC15.31■□□□□ 0.04
Q9CYI0 Gm29741-201ENSMUST00000192667 421 ntBASIC15.31■□□□□ 0.04
Q9CYI0 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC15.31■□□□□ 0.04
Q9CYI0 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Q9CYI0 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Q9CYI0 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Q9CYI0 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Q9CYI0 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Q9CYI0 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Q9CYI0 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Q9CYI0 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Q9CYI0 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Q9CYI0 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Q9CYI0 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC15.31■□□□□ 0.04
Q9CYI0 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Q9CYI0 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Q9CYI0 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Q9CYI0 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Q9CYI0 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Q9CYI0 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Q9CYI0 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Q9CYI0 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Q9CYI0 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Q9CYI0 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Q9CYI0 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Q9CYI0 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Q9CYI0 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Q9CYI0 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Q9CYI0 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Q9CYI0 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC15.3■□□□□ 0.04
Q9CYI0 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Q9CYI0 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Q9CYI0 Gm15240-201ENSMUST00000118156 720 ntBASIC15.3■□□□□ 0.04
Q9CYI0 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Q9CYI0 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Q9CYI0 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Q9CYI0 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Q9CYI0 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Q9CYI0 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Q9CYI0 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Q9CYI0 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Q9CYI0 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Q9CYI0 Gm9002-201ENSMUST00000178437 499 ntBASIC15.3■□□□□ 0.04
Q9CYI0 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Q9CYI0 Gm27701-201ENSMUST00000184498 110 ntBASIC15.3■□□□□ 0.04
Q9CYI0 Mir7654-201ENSMUST00000185082 70 ntBASIC15.3■□□□□ 0.04
Q9CYI0 Gm12500-202ENSMUST00000186471 2428 ntBASIC15.3■□□□□ 0.04
Q9CYI0 Gm7558-201ENSMUST00000193221 1165 ntBASIC15.3■□□□□ 0.04
Q9CYI0 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Q9CYI0 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Q9CYI0 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Q9CYI0 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Q9CYI0 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC15.3■□□□□ 0.04
Q9CYI0 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Q9CYI0 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Q9CYI0 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Q9CYI0 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Q9CYI0 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Q9CYI0 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Q9CYI0 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
Q9CYI0 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Q9CYI0 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC15.3■□□□□ 0.04
Q9CYI0 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms