Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim13Q9CYB0 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim13Q9CYB0 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trim13Q9CYB0 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim13Q9CYB0 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim13Q9CYB0 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trim13Q9CYB0 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim13Q9CYB0 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trim13Q9CYB0 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim13Q9CYB0 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim13Q9CYB0 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim13Q9CYB0 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim13Q9CYB0 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim13Q9CYB0 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim13Q9CYB0 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim13Q9CYB0 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim13Q9CYB0 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim13Q9CYB0 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim13Q9CYB0 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim13Q9CYB0 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim13Q9CYB0 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trim13Q9CYB0 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim13Q9CYB0 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim13Q9CYB0 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.8□□□□□ -0.36
Trim13Q9CYB0 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim13Q9CYB0 Gm5177-201ENSMUST00000183092 997 ntBASIC12.8□□□□□ -0.36
Trim13Q9CYB0 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC12.8□□□□□ -0.36
Trim13Q9CYB0 Gm27301-201ENSMUST00000184012 127 ntBASIC12.8□□□□□ -0.36
Trim13Q9CYB0 Mir7036b-201ENSMUST00000184791 63 ntBASIC12.8□□□□□ -0.36
Trim13Q9CYB0 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim13Q9CYB0 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim13Q9CYB0 Gm43332-201ENSMUST00000202511 1044 ntBASIC12.8□□□□□ -0.36
Trim13Q9CYB0 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim13Q9CYB0 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim13Q9CYB0 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim13Q9CYB0 Nudt18-203ENSMUST00000228768 1578 ntBASIC12.8□□□□□ -0.36
Trim13Q9CYB0 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim13Q9CYB0 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim13Q9CYB0 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trim13Q9CYB0 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim13Q9CYB0 Grk6-205ENSMUST00000224653 2976 ntBASIC12.8□□□□□ -0.36
Trim13Q9CYB0 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim13Q9CYB0 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trim13Q9CYB0 Gm37133-201ENSMUST00000192705 1922 ntBASIC12.8□□□□□ -0.36
Trim13Q9CYB0 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim13Q9CYB0 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Trim13Q9CYB0 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim13Q9CYB0 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim13Q9CYB0 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim13Q9CYB0 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim13Q9CYB0 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.79□□□□□ -0.36
Trim13Q9CYB0 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim13Q9CYB0 Gm5763-201ENSMUST00000155951 1530 ntBASIC12.79□□□□□ -0.36
Trim13Q9CYB0 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim13Q9CYB0 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim13Q9CYB0 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim13Q9CYB0 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Trim13Q9CYB0 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim13Q9CYB0 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim13Q9CYB0 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim13Q9CYB0 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim13Q9CYB0 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC12.79□□□□□ -0.36
Trim13Q9CYB0 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim13Q9CYB0 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim13Q9CYB0 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC12.79□□□□□ -0.36
Trim13Q9CYB0 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim13Q9CYB0 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim13Q9CYB0 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim13Q9CYB0 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim13Q9CYB0 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim13Q9CYB0 AC154527.4-201ENSMUST00000224364 1667 ntBASIC12.79□□□□□ -0.36
Trim13Q9CYB0 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim13Q9CYB0 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC12.79□□□□□ -0.36
Trim13Q9CYB0 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim13Q9CYB0 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim13Q9CYB0 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim13Q9CYB0 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim13Q9CYB0 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim13Q9CYB0 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim13Q9CYB0 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim13Q9CYB0 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim13Q9CYB0 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.79□□□□□ -0.36
Trim13Q9CYB0 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trim13Q9CYB0 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim13Q9CYB0 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim13Q9CYB0 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim13Q9CYB0 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim13Q9CYB0 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim13Q9CYB0 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim13Q9CYB0 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Trim13Q9CYB0 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim13Q9CYB0 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim13Q9CYB0 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim13Q9CYB0 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Trim13Q9CYB0 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim13Q9CYB0 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim13Q9CYB0 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.78□□□□□ -0.36
Trim13Q9CYB0 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim13Q9CYB0 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim13Q9CYB0 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms