Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Khdc3Q9CWU5 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Khdc3Q9CWU5 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Khdc3Q9CWU5 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Khdc3Q9CWU5 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC13.32□□□□□ -0.28
Khdc3Q9CWU5 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Khdc3Q9CWU5 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Khdc3Q9CWU5 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Khdc3Q9CWU5 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Khdc3Q9CWU5 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Khdc3Q9CWU5 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.32□□□□□ -0.28
Khdc3Q9CWU5 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Khdc3Q9CWU5 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Khdc3Q9CWU5 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Khdc3Q9CWU5 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Khdc3Q9CWU5 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Khdc3Q9CWU5 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
Khdc3Q9CWU5 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Khdc3Q9CWU5 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Khdc3Q9CWU5 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Khdc3Q9CWU5 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Khdc3Q9CWU5 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Khdc3Q9CWU5 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Khdc3Q9CWU5 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Khdc3Q9CWU5 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Khdc3Q9CWU5 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Khdc3Q9CWU5 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Khdc3Q9CWU5 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Khdc3Q9CWU5 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Khdc3Q9CWU5 Gm13616-201ENSMUST00000120600 222 ntBASIC13.31□□□□□ -0.28
Khdc3Q9CWU5 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Khdc3Q9CWU5 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Khdc3Q9CWU5 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.31□□□□□ -0.28
Khdc3Q9CWU5 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Khdc3Q9CWU5 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC13.31□□□□□ -0.28
Khdc3Q9CWU5 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC13.31□□□□□ -0.28
Khdc3Q9CWU5 Gm27533-201ENSMUST00000183800 152 ntBASIC13.31□□□□□ -0.28
Khdc3Q9CWU5 Gm37171-201ENSMUST00000192636 1185 ntBASIC13.31□□□□□ -0.28
Khdc3Q9CWU5 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Khdc3Q9CWU5 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Khdc3Q9CWU5 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Khdc3Q9CWU5 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Khdc3Q9CWU5 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Khdc3Q9CWU5 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Khdc3Q9CWU5 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Khdc3Q9CWU5 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Khdc3Q9CWU5 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.31□□□□□ -0.28
Khdc3Q9CWU5 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Khdc3Q9CWU5 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Khdc3Q9CWU5 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Khdc3Q9CWU5 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Khdc3Q9CWU5 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Khdc3Q9CWU5 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Khdc3Q9CWU5 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Khdc3Q9CWU5 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Khdc3Q9CWU5 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Khdc3Q9CWU5 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Khdc3Q9CWU5 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC13.3□□□□□ -0.28
Khdc3Q9CWU5 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Khdc3Q9CWU5 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Khdc3Q9CWU5 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Khdc3Q9CWU5 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Khdc3Q9CWU5 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Khdc3Q9CWU5 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Khdc3Q9CWU5 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Khdc3Q9CWU5 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Khdc3Q9CWU5 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Khdc3Q9CWU5 Gm38294-201ENSMUST00000192831 381 ntBASIC13.3□□□□□ -0.28
Khdc3Q9CWU5 Rbfox2-208ENSMUST00000227930 1218 ntBASIC13.3□□□□□ -0.28
Khdc3Q9CWU5 CT030704.2-201ENSMUST00000228887 494 ntBASIC13.3□□□□□ -0.28
Khdc3Q9CWU5 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Khdc3Q9CWU5 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Khdc3Q9CWU5 Gm5867-201ENSMUST00000063197 592 ntBASIC13.3□□□□□ -0.28
Khdc3Q9CWU5 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Khdc3Q9CWU5 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Khdc3Q9CWU5 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Khdc3Q9CWU5 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Khdc3Q9CWU5 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Khdc3Q9CWU5 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Khdc3Q9CWU5 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Khdc3Q9CWU5 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Khdc3Q9CWU5 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Khdc3Q9CWU5 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Khdc3Q9CWU5 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Khdc3Q9CWU5 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Khdc3Q9CWU5 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Khdc3Q9CWU5 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Khdc3Q9CWU5 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Khdc3Q9CWU5 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Khdc3Q9CWU5 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Khdc3Q9CWU5 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Khdc3Q9CWU5 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Khdc3Q9CWU5 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Khdc3Q9CWU5 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Khdc3Q9CWU5 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.3□□□□□ -0.28
Khdc3Q9CWU5 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Khdc3Q9CWU5 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Khdc3Q9CWU5 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Khdc3Q9CWU5 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Khdc3Q9CWU5 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms