Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ska1Q9CPV1 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Ska1Q9CPV1 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ska1Q9CPV1 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ska1Q9CPV1 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ska1Q9CPV1 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ska1Q9CPV1 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ska1Q9CPV1 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ska1Q9CPV1 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.1□□□□□ -0.31
Ska1Q9CPV1 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Ska1Q9CPV1 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Ska1Q9CPV1 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ska1Q9CPV1 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ska1Q9CPV1 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ska1Q9CPV1 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ska1Q9CPV1 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ska1Q9CPV1 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ska1Q9CPV1 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ska1Q9CPV1 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ska1Q9CPV1 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.09□□□□□ -0.31
Ska1Q9CPV1 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ska1Q9CPV1 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ska1Q9CPV1 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Ska1Q9CPV1 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ska1Q9CPV1 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Ska1Q9CPV1 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC13.09□□□□□ -0.31
Ska1Q9CPV1 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ska1Q9CPV1 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Ska1Q9CPV1 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ska1Q9CPV1 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ska1Q9CPV1 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ska1Q9CPV1 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ska1Q9CPV1 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ska1Q9CPV1 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC13.09□□□□□ -0.31
Ska1Q9CPV1 Gm12017-201ENSMUST00000122453 1003 ntBASIC13.09□□□□□ -0.31
Ska1Q9CPV1 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ska1Q9CPV1 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ska1Q9CPV1 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Ska1Q9CPV1 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ska1Q9CPV1 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC13.09□□□□□ -0.31
Ska1Q9CPV1 Klk2-ps-201ENSMUST00000205342 571 ntBASIC13.09□□□□□ -0.31
Ska1Q9CPV1 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC13.09□□□□□ -0.31
Ska1Q9CPV1 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC13.09□□□□□ -0.31
Ska1Q9CPV1 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC13.09□□□□□ -0.31
Ska1Q9CPV1 Bloc1s5-203ENSMUST00000224902 612 ntBASIC13.09□□□□□ -0.31
Ska1Q9CPV1 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ska1Q9CPV1 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ska1Q9CPV1 Gpr146-202ENSMUST00000053120 1040 ntBASIC13.09□□□□□ -0.31
Ska1Q9CPV1 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ska1Q9CPV1 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ska1Q9CPV1 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Ska1Q9CPV1 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ska1Q9CPV1 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ska1Q9CPV1 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ska1Q9CPV1 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ska1Q9CPV1 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ska1Q9CPV1 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ska1Q9CPV1 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC13.09□□□□□ -0.31
Ska1Q9CPV1 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ska1Q9CPV1 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ska1Q9CPV1 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ska1Q9CPV1 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Ska1Q9CPV1 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ska1Q9CPV1 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ska1Q9CPV1 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Ska1Q9CPV1 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ska1Q9CPV1 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Ska1Q9CPV1 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ska1Q9CPV1 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Ska1Q9CPV1 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Ska1Q9CPV1 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC13.08□□□□□ -0.31
Ska1Q9CPV1 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Ska1Q9CPV1 Gm10729-202ENSMUST00000193403 1375 ntBASIC13.08□□□□□ -0.31
Ska1Q9CPV1 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ska1Q9CPV1 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ska1Q9CPV1 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ska1Q9CPV1 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ska1Q9CPV1 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ska1Q9CPV1 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ska1Q9CPV1 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ska1Q9CPV1 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ska1Q9CPV1 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Ska1Q9CPV1 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ska1Q9CPV1 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ska1Q9CPV1 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Ska1Q9CPV1 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC13.08□□□□□ -0.32
Ska1Q9CPV1 Gm43332-201ENSMUST00000202511 1044 ntBASIC13.08□□□□□ -0.32
Ska1Q9CPV1 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC13.08□□□□□ -0.32
Ska1Q9CPV1 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ska1Q9CPV1 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ska1Q9CPV1 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Ska1Q9CPV1 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Ska1Q9CPV1 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ska1Q9CPV1 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ska1Q9CPV1 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ska1Q9CPV1 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Ska1Q9CPV1 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Ska1Q9CPV1 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ska1Q9CPV1 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Ska1Q9CPV1 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms