Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Gm27301-201ENSMUST00000184012 127 ntBASIC12.5□□□□□ -0.41
Krt88Q9CPR6 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC12.5□□□□□ -0.41
Krt88Q9CPR6 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Krt88Q9CPR6 Gm44608-201ENSMUST00000206827 855 ntBASIC12.5□□□□□ -0.41
Krt88Q9CPR6 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC12.5□□□□□ -0.41
Krt88Q9CPR6 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC12.5□□□□□ -0.41
Krt88Q9CPR6 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Krt88Q9CPR6 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Krt88Q9CPR6 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
Krt88Q9CPR6 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Krt88Q9CPR6 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Krt88Q9CPR6 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Krt88Q9CPR6 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Krt88Q9CPR6 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Krt88Q9CPR6 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Krt88Q9CPR6 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Krt88Q9CPR6 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Krt88Q9CPR6 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Krt88Q9CPR6 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Krt88Q9CPR6 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Krt88Q9CPR6 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Krt88Q9CPR6 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Krt88Q9CPR6 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Krt88Q9CPR6 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Krt88Q9CPR6 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Krt88Q9CPR6 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.49□□□□□ -0.41
Krt88Q9CPR6 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Krt88Q9CPR6 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Krt88Q9CPR6 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Krt88Q9CPR6 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Krt88Q9CPR6 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Krt88Q9CPR6 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Krt88Q9CPR6 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Krt88Q9CPR6 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Krt88Q9CPR6 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Krt88Q9CPR6 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Krt88Q9CPR6 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Krt88Q9CPR6 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Krt88Q9CPR6 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Krt88Q9CPR6 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Krt88Q9CPR6 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC12.49□□□□□ -0.41
Krt88Q9CPR6 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Krt88Q9CPR6 Gm13597-201ENSMUST00000121239 375 ntBASIC12.49□□□□□ -0.41
Krt88Q9CPR6 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Krt88Q9CPR6 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC12.49□□□□□ -0.41
Krt88Q9CPR6 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC12.49□□□□□ -0.41
Krt88Q9CPR6 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC12.49□□□□□ -0.41
Krt88Q9CPR6 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Krt88Q9CPR6 AC161829.1-201ENSMUST00000220298 281 ntBASIC12.49□□□□□ -0.41
Krt88Q9CPR6 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Krt88Q9CPR6 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Krt88Q9CPR6 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Krt88Q9CPR6 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Krt88Q9CPR6 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Krt88Q9CPR6 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Krt88Q9CPR6 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Krt88Q9CPR6 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Krt88Q9CPR6 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Krt88Q9CPR6 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Krt88Q9CPR6 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Krt88Q9CPR6 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Krt88Q9CPR6 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Krt88Q9CPR6 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Krt88Q9CPR6 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Krt88Q9CPR6 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Krt88Q9CPR6 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Krt88Q9CPR6 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Krt88Q9CPR6 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Krt88Q9CPR6 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC12.48□□□□□ -0.41
Krt88Q9CPR6 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Krt88Q9CPR6 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Krt88Q9CPR6 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Krt88Q9CPR6 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Krt88Q9CPR6 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Krt88Q9CPR6 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Krt88Q9CPR6 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Krt88Q9CPR6 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC12.48□□□□□ -0.41
Krt88Q9CPR6 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Krt88Q9CPR6 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Krt88Q9CPR6 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Krt88Q9CPR6 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Krt88Q9CPR6 Klk2-ps-201ENSMUST00000205342 571 ntBASIC12.48□□□□□ -0.41
Krt88Q9CPR6 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC12.48□□□□□ -0.41
Krt88Q9CPR6 Gm18195-201ENSMUST00000207604 706 ntBASIC12.48□□□□□ -0.41
Krt88Q9CPR6 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Krt88Q9CPR6 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Krt88Q9CPR6 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Krt88Q9CPR6 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Krt88Q9CPR6 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Krt88Q9CPR6 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Krt88Q9CPR6 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Krt88Q9CPR6 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Krt88Q9CPR6 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Krt88Q9CPR6 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Krt88Q9CPR6 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Krt88Q9CPR6 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Krt88Q9CPR6 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Krt88Q9CPR6 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Krt88Q9CPR6 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Krt88Q9CPR6 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms