Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Gm14665-201ENSMUST00000122294 557 ntBASIC13.81□□□□□ -0.2
Cdh23Q99PF4 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Cdh23Q99PF4 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC13.81□□□□□ -0.2
Cdh23Q99PF4 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdh23Q99PF4 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC13.81□□□□□ -0.2
Cdh23Q99PF4 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdh23Q99PF4 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cdh23Q99PF4 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdh23Q99PF4 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cdh23Q99PF4 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC13.81□□□□□ -0.2
Cdh23Q99PF4 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Cdh23Q99PF4 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cdh23Q99PF4 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cdh23Q99PF4 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cdh23Q99PF4 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Cdh23Q99PF4 Gm9755-201ENSMUST00000032981 1356 ntBASIC13.8□□□□□ -0.2
Cdh23Q99PF4 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cdh23Q99PF4 Gm10434-201ENSMUST00000101158 471 ntBASIC13.8□□□□□ -0.2
Cdh23Q99PF4 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC13.8□□□□□ -0.2
Cdh23Q99PF4 Gm13665-201ENSMUST00000120830 528 ntBASIC13.8□□□□□ -0.2
Cdh23Q99PF4 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cdh23Q99PF4 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cdh23Q99PF4 Gm45630-201ENSMUST00000210243 1911 ntBASIC13.8□□□□□ -0.2
Cdh23Q99PF4 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cdh23Q99PF4 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cdh23Q99PF4 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Cdh23Q99PF4 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Cdh23Q99PF4 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cdh23Q99PF4 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cdh23Q99PF4 Gm4607-201ENSMUST00000206649 577 ntBASIC13.8□□□□□ -0.2
Cdh23Q99PF4 AC126549.2-201ENSMUST00000223997 1976 ntBASIC13.8□□□□□ -0.2
Cdh23Q99PF4 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC13.8□□□□□ -0.2
Cdh23Q99PF4 AC168058.1-201ENSMUST00000219521 2282 ntBASIC13.8□□□□□ -0.2
Cdh23Q99PF4 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cdh23Q99PF4 Gm9279-201ENSMUST00000223175 1606 ntBASIC13.79□□□□□ -0.2
Cdh23Q99PF4 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cdh23Q99PF4 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC13.79□□□□□ -0.2
Cdh23Q99PF4 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cdh23Q99PF4 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cdh23Q99PF4 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cdh23Q99PF4 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Cdh23Q99PF4 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC13.79□□□□□ -0.2
Cdh23Q99PF4 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cdh23Q99PF4 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Cdh23Q99PF4 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cdh23Q99PF4 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cdh23Q99PF4 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cdh23Q99PF4 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cdh23Q99PF4 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cdh23Q99PF4 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC13.79□□□□□ -0.2
Cdh23Q99PF4 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cdh23Q99PF4 Gm8885-201ENSMUST00000189382 598 ntBASIC13.79□□□□□ -0.2
Cdh23Q99PF4 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cdh23Q99PF4 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Cdh23Q99PF4 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cdh23Q99PF4 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cdh23Q99PF4 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cdh23Q99PF4 Camk2g-217ENSMUST00000226630 1937 ntBASIC13.79□□□□□ -0.2
Cdh23Q99PF4 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC13.79□□□□□ -0.2
Cdh23Q99PF4 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cdh23Q99PF4 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
Cdh23Q99PF4 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cdh23Q99PF4 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC13.79□□□□□ -0.2
Cdh23Q99PF4 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Cdh23Q99PF4 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cdh23Q99PF4 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cdh23Q99PF4 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cdh23Q99PF4 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdh23Q99PF4 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdh23Q99PF4 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdh23Q99PF4 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdh23Q99PF4 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Cdh23Q99PF4 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Cdh23Q99PF4 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
Cdh23Q99PF4 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC13.78□□□□□ -0.2
Cdh23Q99PF4 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cdh23Q99PF4 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
Cdh23Q99PF4 Mir6958-201ENSMUST00000184207 73 ntBASIC13.78□□□□□ -0.2
Cdh23Q99PF4 Gm44069-201ENSMUST00000204898 506 ntBASIC13.78□□□□□ -0.2
Cdh23Q99PF4 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC13.78□□□□□ -0.2
Cdh23Q99PF4 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC13.78□□□□□ -0.2
Cdh23Q99PF4 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdh23Q99PF4 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdh23Q99PF4 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Cdh23Q99PF4 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdh23Q99PF4 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdh23Q99PF4 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdh23Q99PF4 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cdh23Q99PF4 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC13.78□□□□□ -0.2
Cdh23Q99PF4 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC13.78□□□□□ -0.2
Cdh23Q99PF4 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Cdh23Q99PF4 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdh23Q99PF4 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdh23Q99PF4 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Cdh23Q99PF4 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cdh23Q99PF4 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC13.78□□□□□ -0.2
Cdh23Q99PF4 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdh23Q99PF4 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdh23Q99PF4 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cdh23Q99PF4 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms