Protein–RNA interactions for Protein: Q99LG0

Usp16, Ubiquitin carboxyl-terminal hydrolase 16, mousemouse

Predictions only

Length 825 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp16Q99LG0 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC17.67■□□□□ 0.42
Usp16Q99LG0 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC17.67■□□□□ 0.42
Usp16Q99LG0 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp16Q99LG0 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp16Q99LG0 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp16Q99LG0 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Usp16Q99LG0 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Usp16Q99LG0 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp16Q99LG0 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC17.67■□□□□ 0.42
Usp16Q99LG0 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Usp16Q99LG0 Gm12490-201ENSMUST00000120255 560 ntBASIC17.67■□□□□ 0.42
Usp16Q99LG0 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC17.67■□□□□ 0.42
Usp16Q99LG0 Gm15376-201ENSMUST00000122258 783 ntBASIC17.67■□□□□ 0.42
Usp16Q99LG0 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC17.67■□□□□ 0.42
Usp16Q99LG0 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp16Q99LG0 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Usp16Q99LG0 AC156560.2-201ENSMUST00000221232 264 ntBASIC17.67■□□□□ 0.42
Usp16Q99LG0 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC17.67■□□□□ 0.42
Usp16Q99LG0 AC140375.2-201ENSMUST00000225283 584 ntBASIC17.67■□□□□ 0.42
Usp16Q99LG0 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Usp16Q99LG0 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC17.67■□□□□ 0.42
Usp16Q99LG0 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp16Q99LG0 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp16Q99LG0 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC17.67■□□□□ 0.42
Usp16Q99LG0 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC17.66■□□□□ 0.42
Usp16Q99LG0 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp16Q99LG0 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Usp16Q99LG0 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC17.66■□□□□ 0.42
Usp16Q99LG0 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp16Q99LG0 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp16Q99LG0 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp16Q99LG0 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp16Q99LG0 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Usp16Q99LG0 Gm12138-201ENSMUST00000122180 951 ntBASIC17.66■□□□□ 0.42
Usp16Q99LG0 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Usp16Q99LG0 Gm27772-201ENSMUST00000184900 187 ntBASIC17.66■□□□□ 0.42
Usp16Q99LG0 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Usp16Q99LG0 Gm7558-201ENSMUST00000193221 1165 ntBASIC17.66■□□□□ 0.42
Usp16Q99LG0 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC17.66■□□□□ 0.42
Usp16Q99LG0 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp16Q99LG0 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp16Q99LG0 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp16Q99LG0 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Usp16Q99LG0 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp16Q99LG0 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Usp16Q99LG0 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Usp16Q99LG0 Gm9115-201ENSMUST00000120192 1348 ntBASIC17.66■□□□□ 0.42
Usp16Q99LG0 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Usp16Q99LG0 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp16Q99LG0 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Usp16Q99LG0 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp16Q99LG0 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Usp16Q99LG0 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp16Q99LG0 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Usp16Q99LG0 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp16Q99LG0 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp16Q99LG0 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC17.65■□□□□ 0.42
Usp16Q99LG0 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Usp16Q99LG0 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp16Q99LG0 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp16Q99LG0 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC17.65■□□□□ 0.42
Usp16Q99LG0 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp16Q99LG0 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Usp16Q99LG0 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC17.65■□□□□ 0.42
Usp16Q99LG0 Gm11524-201ENSMUST00000119349 807 ntBASIC17.65■□□□□ 0.42
Usp16Q99LG0 Gm14730-201ENSMUST00000122378 1045 ntBASIC17.65■□□□□ 0.42
Usp16Q99LG0 Gm7498-201ENSMUST00000203282 1084 ntBASIC17.65■□□□□ 0.42
Usp16Q99LG0 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Usp16Q99LG0 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp16Q99LG0 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Usp16Q99LG0 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Usp16Q99LG0 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp16Q99LG0 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Usp16Q99LG0 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp16Q99LG0 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp16Q99LG0 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp16Q99LG0 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Usp16Q99LG0 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC17.65■□□□□ 0.42
Usp16Q99LG0 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC17.65■□□□□ 0.42
Usp16Q99LG0 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp16Q99LG0 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Usp16Q99LG0 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
Usp16Q99LG0 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp16Q99LG0 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp16Q99LG0 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Usp16Q99LG0 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp16Q99LG0 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp16Q99LG0 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
Usp16Q99LG0 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp16Q99LG0 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Usp16Q99LG0 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Usp16Q99LG0 Gm5745-201ENSMUST00000183748 313 ntBASIC17.64■□□□□ 0.41
Usp16Q99LG0 Mir7654-201ENSMUST00000185082 70 ntBASIC17.64■□□□□ 0.41
Usp16Q99LG0 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp16Q99LG0 Gm18307-201ENSMUST00000206864 949 ntBASIC17.64■□□□□ 0.41
Usp16Q99LG0 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC17.64■□□□□ 0.41
Usp16Q99LG0 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC17.64■□□□□ 0.41
Usp16Q99LG0 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC17.64■□□□□ 0.41
Usp16Q99LG0 AC159006.1-201ENSMUST00000226396 258 ntBASIC17.64■□□□□ 0.41
Usp16Q99LG0 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms