Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lysmd3Q99LE3 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lysmd3Q99LE3 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Lysmd3Q99LE3 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC14.39□□□□□ -0.11
Lysmd3Q99LE3 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Lysmd3Q99LE3 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Lysmd3Q99LE3 Gm3809-201ENSMUST00000180973 1006 ntBASIC14.39□□□□□ -0.11
Lysmd3Q99LE3 Mir6392-201ENSMUST00000184924 108 ntBASIC14.39□□□□□ -0.11
Lysmd3Q99LE3 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC14.39□□□□□ -0.11
Lysmd3Q99LE3 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC14.39□□□□□ -0.11
Lysmd3Q99LE3 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lysmd3Q99LE3 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lysmd3Q99LE3 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC14.39□□□□□ -0.11
Lysmd3Q99LE3 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lysmd3Q99LE3 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lysmd3Q99LE3 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lysmd3Q99LE3 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lysmd3Q99LE3 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lysmd3Q99LE3 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14.39□□□□□ -0.11
Lysmd3Q99LE3 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Lysmd3Q99LE3 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
Lysmd3Q99LE3 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lysmd3Q99LE3 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Lysmd3Q99LE3 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Lysmd3Q99LE3 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lysmd3Q99LE3 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Lysmd3Q99LE3 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Lysmd3Q99LE3 Gm12490-201ENSMUST00000120255 560 ntBASIC14.38□□□□□ -0.11
Lysmd3Q99LE3 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC14.38□□□□□ -0.11
Lysmd3Q99LE3 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC14.38□□□□□ -0.11
Lysmd3Q99LE3 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Lysmd3Q99LE3 Gm24420-201ENSMUST00000176676 59 ntBASIC14.38□□□□□ -0.11
Lysmd3Q99LE3 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lysmd3Q99LE3 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Lysmd3Q99LE3 Gm7653-201ENSMUST00000214567 508 ntBASIC14.38□□□□□ -0.11
Lysmd3Q99LE3 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lysmd3Q99LE3 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lysmd3Q99LE3 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lysmd3Q99LE3 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lysmd3Q99LE3 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC14.38□□□□□ -0.11
Lysmd3Q99LE3 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lysmd3Q99LE3 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lysmd3Q99LE3 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lysmd3Q99LE3 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.38□□□□□ -0.11
Lysmd3Q99LE3 Ntrk2-209ENSMUST00000225950 2640 ntBASIC14.38□□□□□ -0.11
Lysmd3Q99LE3 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lysmd3Q99LE3 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lysmd3Q99LE3 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Lysmd3Q99LE3 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Lysmd3Q99LE3 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Lysmd3Q99LE3 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lysmd3Q99LE3 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lysmd3Q99LE3 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Lysmd3Q99LE3 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Lysmd3Q99LE3 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Lysmd3Q99LE3 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lysmd3Q99LE3 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lysmd3Q99LE3 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lysmd3Q99LE3 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lysmd3Q99LE3 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC14.37□□□□□ -0.11
Lysmd3Q99LE3 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lysmd3Q99LE3 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC14.37□□□□□ -0.11
Lysmd3Q99LE3 Gm4971-201ENSMUST00000205991 1108 ntBASIC14.37□□□□□ -0.11
Lysmd3Q99LE3 AC155286.1-201ENSMUST00000218632 448 ntBASIC14.37□□□□□ -0.11
Lysmd3Q99LE3 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lysmd3Q99LE3 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lysmd3Q99LE3 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lysmd3Q99LE3 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Lysmd3Q99LE3 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Lysmd3Q99LE3 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Lysmd3Q99LE3 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lysmd3Q99LE3 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lysmd3Q99LE3 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Lysmd3Q99LE3 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC14.37□□□□□ -0.11
Lysmd3Q99LE3 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lysmd3Q99LE3 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Lysmd3Q99LE3 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lysmd3Q99LE3 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Lysmd3Q99LE3 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lysmd3Q99LE3 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lysmd3Q99LE3 Gm38037-201ENSMUST00000192600 1624 ntBASIC14.37□□□□□ -0.11
Lysmd3Q99LE3 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
Lysmd3Q99LE3 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
Lysmd3Q99LE3 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lysmd3Q99LE3 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lysmd3Q99LE3 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC14.36□□□□□ -0.11
Lysmd3Q99LE3 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lysmd3Q99LE3 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lysmd3Q99LE3 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lysmd3Q99LE3 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
Lysmd3Q99LE3 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lysmd3Q99LE3 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lysmd3Q99LE3 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Lysmd3Q99LE3 Gm12341-201ENSMUST00000119724 503 ntBASIC14.36□□□□□ -0.11
Lysmd3Q99LE3 Gm9908-201ENSMUST00000211534 448 ntBASIC14.36□□□□□ -0.11
Lysmd3Q99LE3 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lysmd3Q99LE3 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Lysmd3Q99LE3 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lysmd3Q99LE3 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Lysmd3Q99LE3 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms