Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Thumpd1Q99J36 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.35□□□□□ -0.43
Thumpd1Q99J36 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Thumpd1Q99J36 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Thumpd1Q99J36 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Thumpd1Q99J36 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.35□□□□□ -0.43
Thumpd1Q99J36 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Thumpd1Q99J36 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC12.35□□□□□ -0.43
Thumpd1Q99J36 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Thumpd1Q99J36 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC12.35□□□□□ -0.43
Thumpd1Q99J36 Gm7977-201ENSMUST00000193787 748 ntBASIC12.35□□□□□ -0.43
Thumpd1Q99J36 Gm9449-201ENSMUST00000207265 1011 ntBASIC12.35□□□□□ -0.43
Thumpd1Q99J36 AC154572.2-201ENSMUST00000225105 997 ntBASIC12.35□□□□□ -0.43
Thumpd1Q99J36 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Thumpd1Q99J36 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Thumpd1Q99J36 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Thumpd1Q99J36 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Thumpd1Q99J36 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Thumpd1Q99J36 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC12.35□□□□□ -0.43
Thumpd1Q99J36 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Thumpd1Q99J36 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Thumpd1Q99J36 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC12.35□□□□□ -0.43
Thumpd1Q99J36 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Thumpd1Q99J36 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Thumpd1Q99J36 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Thumpd1Q99J36 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Thumpd1Q99J36 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Thumpd1Q99J36 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Thumpd1Q99J36 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Thumpd1Q99J36 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Thumpd1Q99J36 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Thumpd1Q99J36 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Thumpd1Q99J36 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Thumpd1Q99J36 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Thumpd1Q99J36 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.34□□□□□ -0.43
Thumpd1Q99J36 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Thumpd1Q99J36 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Thumpd1Q99J36 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Thumpd1Q99J36 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Thumpd1Q99J36 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Thumpd1Q99J36 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Thumpd1Q99J36 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Thumpd1Q99J36 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Thumpd1Q99J36 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Thumpd1Q99J36 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC12.34□□□□□ -0.43
Thumpd1Q99J36 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Thumpd1Q99J36 Gm6973-201ENSMUST00000117080 721 ntBASIC12.34□□□□□ -0.43
Thumpd1Q99J36 AA543401-201ENSMUST00000164248 1269 ntBASIC12.34□□□□□ -0.43
Thumpd1Q99J36 Mir5131-201ENSMUST00000175426 93 ntBASIC12.34□□□□□ -0.43
Thumpd1Q99J36 Gm28659-201ENSMUST00000188013 759 ntBASIC12.34□□□□□ -0.43
Thumpd1Q99J36 Gm29741-201ENSMUST00000192667 421 ntBASIC12.34□□□□□ -0.43
Thumpd1Q99J36 AC149294.4-201ENSMUST00000227870 882 ntBASIC12.34□□□□□ -0.43
Thumpd1Q99J36 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Thumpd1Q99J36 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Thumpd1Q99J36 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Thumpd1Q99J36 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Thumpd1Q99J36 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Thumpd1Q99J36 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Thumpd1Q99J36 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Thumpd1Q99J36 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC12.34□□□□□ -0.43
Thumpd1Q99J36 Gm8775-201ENSMUST00000170943 1327 ntBASIC12.34□□□□□ -0.43
Thumpd1Q99J36 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Thumpd1Q99J36 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12.34□□□□□ -0.43
Thumpd1Q99J36 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Thumpd1Q99J36 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Thumpd1Q99J36 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Thumpd1Q99J36 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.43
Thumpd1Q99J36 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Thumpd1Q99J36 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.43
Thumpd1Q99J36 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Thumpd1Q99J36 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.33□□□□□ -0.43
Thumpd1Q99J36 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.43
Thumpd1Q99J36 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Thumpd1Q99J36 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Thumpd1Q99J36 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Thumpd1Q99J36 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Thumpd1Q99J36 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Thumpd1Q99J36 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Thumpd1Q99J36 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Thumpd1Q99J36 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Thumpd1Q99J36 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Thumpd1Q99J36 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Thumpd1Q99J36 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Thumpd1Q99J36 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Thumpd1Q99J36 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC12.33□□□□□ -0.44
Thumpd1Q99J36 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC12.33□□□□□ -0.44
Thumpd1Q99J36 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Thumpd1Q99J36 Rpph1-201ENSMUST00000175096 319 ntBASIC12.33□□□□□ -0.44
Thumpd1Q99J36 AA619741-201ENSMUST00000195095 646 ntBASIC12.33□□□□□ -0.44
Thumpd1Q99J36 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Thumpd1Q99J36 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC12.33□□□□□ -0.44
Thumpd1Q99J36 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Thumpd1Q99J36 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Thumpd1Q99J36 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Thumpd1Q99J36 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Thumpd1Q99J36 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Thumpd1Q99J36 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Thumpd1Q99J36 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Thumpd1Q99J36 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Thumpd1Q99J36 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms