Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 AC154806.6-201ENSMUST00000228192 202 ntBASIC14.5□□□□□ -0.09
Pcdha3Q91Y16 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC14.5□□□□□ -0.09
Pcdha3Q91Y16 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdha3Q91Y16 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdha3Q91Y16 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdha3Q91Y16 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdha3Q91Y16 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdha3Q91Y16 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdha3Q91Y16 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdha3Q91Y16 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.5□□□□□ -0.09
Pcdha3Q91Y16 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdha3Q91Y16 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Pcdha3Q91Y16 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Pcdha3Q91Y16 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdha3Q91Y16 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdha3Q91Y16 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdha3Q91Y16 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdha3Q91Y16 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC14.49□□□□□ -0.09
Pcdha3Q91Y16 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Pcdha3Q91Y16 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Pcdha3Q91Y16 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdha3Q91Y16 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdha3Q91Y16 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdha3Q91Y16 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC14.49□□□□□ -0.09
Pcdha3Q91Y16 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
Pcdha3Q91Y16 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC14.49□□□□□ -0.09
Pcdha3Q91Y16 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC14.49□□□□□ -0.09
Pcdha3Q91Y16 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdha3Q91Y16 Gm5425-201ENSMUST00000214125 459 ntBASIC14.49□□□□□ -0.09
Pcdha3Q91Y16 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdha3Q91Y16 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC14.49□□□□□ -0.09
Pcdha3Q91Y16 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdha3Q91Y16 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdha3Q91Y16 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdha3Q91Y16 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdha3Q91Y16 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdha3Q91Y16 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Pcdha3Q91Y16 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Pcdha3Q91Y16 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Pcdha3Q91Y16 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdha3Q91Y16 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdha3Q91Y16 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdha3Q91Y16 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC14.48□□□□□ -0.09
Pcdha3Q91Y16 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Pcdha3Q91Y16 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Pcdha3Q91Y16 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdha3Q91Y16 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdha3Q91Y16 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC14.48□□□□□ -0.09
Pcdha3Q91Y16 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdha3Q91Y16 Gm15487-201ENSMUST00000122373 465 ntBASIC14.48□□□□□ -0.09
Pcdha3Q91Y16 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Pcdha3Q91Y16 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC14.48□□□□□ -0.09
Pcdha3Q91Y16 AC153872.1-201ENSMUST00000199539 128 ntBASIC14.48□□□□□ -0.09
Pcdha3Q91Y16 AC125206.2-201ENSMUST00000217454 574 ntBASIC14.48□□□□□ -0.09
Pcdha3Q91Y16 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdha3Q91Y16 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC14.48□□□□□ -0.09
Pcdha3Q91Y16 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdha3Q91Y16 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.48□□□□□ -0.09
Pcdha3Q91Y16 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC14.48□□□□□ -0.09
Pcdha3Q91Y16 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdha3Q91Y16 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
Pcdha3Q91Y16 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdha3Q91Y16 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdha3Q91Y16 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdha3Q91Y16 Matn2-206ENSMUST00000228570 2798 ntBASIC14.48□□□□□ -0.09
Pcdha3Q91Y16 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdha3Q91Y16 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC14.48□□□□□ -0.09
Pcdha3Q91Y16 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC14.48□□□□□ -0.09
Pcdha3Q91Y16 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdha3Q91Y16 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Pcdha3Q91Y16 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdha3Q91Y16 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdha3Q91Y16 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Pcdha3Q91Y16 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdha3Q91Y16 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdha3Q91Y16 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdha3Q91Y16 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdha3Q91Y16 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdha3Q91Y16 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdha3Q91Y16 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Pcdha3Q91Y16 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdha3Q91Y16 Gm24694-201ENSMUST00000180054 110 ntBASIC14.47□□□□□ -0.09
Pcdha3Q91Y16 Gm27437-201ENSMUST00000183429 107 ntBASIC14.47□□□□□ -0.09
Pcdha3Q91Y16 Gm27663-201ENSMUST00000184839 110 ntBASIC14.47□□□□□ -0.09
Pcdha3Q91Y16 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdha3Q91Y16 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdha3Q91Y16 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Pcdha3Q91Y16 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdha3Q91Y16 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
Pcdha3Q91Y16 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Pcdha3Q91Y16 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdha3Q91Y16 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdha3Q91Y16 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Pcdha3Q91Y16 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdha3Q91Y16 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdha3Q91Y16 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdha3Q91Y16 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdha3Q91Y16 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdha3Q91Y16 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC14.46□□□□□ -0.09
Pcdha3Q91Y16 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms