Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdha9Q91Y11 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdha9Q91Y11 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdha9Q91Y11 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdha9Q91Y11 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdha9Q91Y11 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Pcdha9Q91Y11 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdha9Q91Y11 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdha9Q91Y11 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdha9Q91Y11 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Pcdha9Q91Y11 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdha9Q91Y11 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdha9Q91Y11 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdha9Q91Y11 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
Pcdha9Q91Y11 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdha9Q91Y11 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdha9Q91Y11 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdha9Q91Y11 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdha9Q91Y11 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdha9Q91Y11 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdha9Q91Y11 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdha9Q91Y11 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Pcdha9Q91Y11 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdha9Q91Y11 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Pcdha9Q91Y11 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdha9Q91Y11 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Pcdha9Q91Y11 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Pcdha9Q91Y11 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC14.71□□□□□ -0.05
Pcdha9Q91Y11 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdha9Q91Y11 Mir6977-201ENSMUST00000184960 64 ntBASIC14.71□□□□□ -0.05
Pcdha9Q91Y11 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdha9Q91Y11 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC14.71□□□□□ -0.05
Pcdha9Q91Y11 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Pcdha9Q91Y11 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC14.71□□□□□ -0.05
Pcdha9Q91Y11 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdha9Q91Y11 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdha9Q91Y11 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Pcdha9Q91Y11 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdha9Q91Y11 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdha9Q91Y11 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdha9Q91Y11 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Pcdha9Q91Y11 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdha9Q91Y11 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdha9Q91Y11 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Pcdha9Q91Y11 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Pcdha9Q91Y11 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Pcdha9Q91Y11 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Pcdha9Q91Y11 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.06
Pcdha9Q91Y11 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC14.71□□□□□ -0.06
Pcdha9Q91Y11 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Pcdha9Q91Y11 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Pcdha9Q91Y11 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Pcdha9Q91Y11 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Pcdha9Q91Y11 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Pcdha9Q91Y11 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Pcdha9Q91Y11 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.7□□□□□ -0.06
Pcdha9Q91Y11 Gm37133-201ENSMUST00000192705 1922 ntBASIC14.7□□□□□ -0.06
Pcdha9Q91Y11 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdha9Q91Y11 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC14.7□□□□□ -0.06
Pcdha9Q91Y11 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Pcdha9Q91Y11 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Pcdha9Q91Y11 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdha9Q91Y11 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Pcdha9Q91Y11 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdha9Q91Y11 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdha9Q91Y11 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC14.7□□□□□ -0.06
Pcdha9Q91Y11 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC14.7□□□□□ -0.06
Pcdha9Q91Y11 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdha9Q91Y11 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdha9Q91Y11 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdha9Q91Y11 Gm27437-201ENSMUST00000183429 107 ntBASIC14.7□□□□□ -0.06
Pcdha9Q91Y11 Gm28760-201ENSMUST00000185995 736 ntBASIC14.7□□□□□ -0.06
Pcdha9Q91Y11 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC14.7□□□□□ -0.06
Pcdha9Q91Y11 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC14.7□□□□□ -0.06
Pcdha9Q91Y11 AC131997.1-201ENSMUST00000228611 1229 ntBASIC14.7□□□□□ -0.06
Pcdha9Q91Y11 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdha9Q91Y11 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdha9Q91Y11 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
Pcdha9Q91Y11 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdha9Q91Y11 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdha9Q91Y11 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Pcdha9Q91Y11 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdha9Q91Y11 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdha9Q91Y11 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdha9Q91Y11 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdha9Q91Y11 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14.7□□□□□ -0.06
Pcdha9Q91Y11 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdha9Q91Y11 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdha9Q91Y11 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Pcdha9Q91Y11 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdha9Q91Y11 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdha9Q91Y11 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdha9Q91Y11 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdha9Q91Y11 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdha9Q91Y11 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Pcdha9Q91Y11 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdha9Q91Y11 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdha9Q91Y11 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdha9Q91Y11 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdha9Q91Y11 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 84.2 ms