Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb22Q91XZ8 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
Pcdhb22Q91XZ8 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb22Q91XZ8 Gm31326-201ENSMUST00000191856 1048 ntBASIC16.16■□□□□ 0.18
Pcdhb22Q91XZ8 Gm5279-201ENSMUST00000199575 745 ntBASIC16.16■□□□□ 0.18
Pcdhb22Q91XZ8 Gm44855-201ENSMUST00000205725 362 ntBASIC16.16■□□□□ 0.18
Pcdhb22Q91XZ8 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb22Q91XZ8 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb22Q91XZ8 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb22Q91XZ8 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC16.16■□□□□ 0.18
Pcdhb22Q91XZ8 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb22Q91XZ8 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb22Q91XZ8 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb22Q91XZ8 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb22Q91XZ8 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Pcdhb22Q91XZ8 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb22Q91XZ8 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb22Q91XZ8 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC16.16■□□□□ 0.18
Pcdhb22Q91XZ8 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb22Q91XZ8 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb22Q91XZ8 Gm38037-201ENSMUST00000192600 1624 ntBASIC16.16■□□□□ 0.18
Pcdhb22Q91XZ8 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Pcdhb22Q91XZ8 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb22Q91XZ8 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Pcdhb22Q91XZ8 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Pcdhb22Q91XZ8 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb22Q91XZ8 Gm12626-201ENSMUST00000117339 1983 ntBASIC16.15■□□□□ 0.18
Pcdhb22Q91XZ8 Gm12623-201ENSMUST00000119849 1983 ntBASIC16.15■□□□□ 0.18
Pcdhb22Q91XZ8 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb22Q91XZ8 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Pcdhb22Q91XZ8 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb22Q91XZ8 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC16.15■□□□□ 0.18
Pcdhb22Q91XZ8 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb22Q91XZ8 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb22Q91XZ8 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb22Q91XZ8 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Pcdhb22Q91XZ8 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb22Q91XZ8 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb22Q91XZ8 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
Pcdhb22Q91XZ8 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb22Q91XZ8 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC16.15■□□□□ 0.18
Pcdhb22Q91XZ8 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb22Q91XZ8 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb22Q91XZ8 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb22Q91XZ8 Gm6218-201ENSMUST00000219812 628 ntBASIC16.15■□□□□ 0.18
Pcdhb22Q91XZ8 AC131997.1-201ENSMUST00000228611 1229 ntBASIC16.15■□□□□ 0.18
Pcdhb22Q91XZ8 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb22Q91XZ8 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb22Q91XZ8 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC16.15■□□□□ 0.18
Pcdhb22Q91XZ8 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb22Q91XZ8 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC16.15■□□□□ 0.18
Pcdhb22Q91XZ8 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Pcdhb22Q91XZ8 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb22Q91XZ8 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
Pcdhb22Q91XZ8 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb22Q91XZ8 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb22Q91XZ8 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb22Q91XZ8 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb22Q91XZ8 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb22Q91XZ8 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Pcdhb22Q91XZ8 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Pcdhb22Q91XZ8 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Pcdhb22Q91XZ8 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.18
Pcdhb22Q91XZ8 Gm37015-201ENSMUST00000192763 1521 ntBASIC16.14■□□□□ 0.18
Pcdhb22Q91XZ8 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb22Q91XZ8 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb22Q91XZ8 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb22Q91XZ8 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC16.14■□□□□ 0.17
Pcdhb22Q91XZ8 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Pcdhb22Q91XZ8 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb22Q91XZ8 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb22Q91XZ8 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb22Q91XZ8 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb22Q91XZ8 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Pcdhb22Q91XZ8 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb22Q91XZ8 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Pcdhb22Q91XZ8 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Pcdhb22Q91XZ8 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb22Q91XZ8 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC16.14■□□□□ 0.17
Pcdhb22Q91XZ8 Gm5626-201ENSMUST00000222151 1058 ntBASIC16.14■□□□□ 0.17
Pcdhb22Q91XZ8 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb22Q91XZ8 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC16.14■□□□□ 0.17
Pcdhb22Q91XZ8 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb22Q91XZ8 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb22Q91XZ8 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC16.14■□□□□ 0.17
Pcdhb22Q91XZ8 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Pcdhb22Q91XZ8 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb22Q91XZ8 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC16.13■□□□□ 0.17
Pcdhb22Q91XZ8 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb22Q91XZ8 Syt7-205ENSMUST00000224135 1557 ntBASIC16.13■□□□□ 0.17
Pcdhb22Q91XZ8 AC166491.1-201ENSMUST00000227053 2308 ntBASIC16.13■□□□□ 0.17
Pcdhb22Q91XZ8 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb22Q91XZ8 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb22Q91XZ8 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb22Q91XZ8 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb22Q91XZ8 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb22Q91XZ8 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb22Q91XZ8 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb22Q91XZ8 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb22Q91XZ8 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms