Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb3Q91XZ7 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb3Q91XZ7 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb3Q91XZ7 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC13.92□□□□□ -0.18
Pcdhb3Q91XZ7 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC13.92□□□□□ -0.18
Pcdhb3Q91XZ7 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb3Q91XZ7 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Pcdhb3Q91XZ7 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC13.92□□□□□ -0.18
Pcdhb3Q91XZ7 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb3Q91XZ7 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC13.92□□□□□ -0.18
Pcdhb3Q91XZ7 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
Pcdhb3Q91XZ7 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Pcdhb3Q91XZ7 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb3Q91XZ7 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb3Q91XZ7 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Pcdhb3Q91XZ7 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC13.92□□□□□ -0.18
Pcdhb3Q91XZ7 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Pcdhb3Q91XZ7 AC151286.1-201ENSMUST00000198489 145 ntBASIC13.92□□□□□ -0.18
Pcdhb3Q91XZ7 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC13.92□□□□□ -0.18
Pcdhb3Q91XZ7 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb3Q91XZ7 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Pcdhb3Q91XZ7 Gm36377-201ENSMUST00000220833 757 ntTSL 2 BASIC13.92□□□□□ -0.18
Pcdhb3Q91XZ7 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb3Q91XZ7 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb3Q91XZ7 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb3Q91XZ7 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Pcdhb3Q91XZ7 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb3Q91XZ7 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb3Q91XZ7 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb3Q91XZ7 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb3Q91XZ7 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC13.92□□□□□ -0.18
Pcdhb3Q91XZ7 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC13.92□□□□□ -0.18
Pcdhb3Q91XZ7 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb3Q91XZ7 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Pcdhb3Q91XZ7 Gm5648-201ENSMUST00000122244 1587 ntBASIC13.92□□□□□ -0.18
Pcdhb3Q91XZ7 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC13.92□□□□□ -0.18
Pcdhb3Q91XZ7 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb3Q91XZ7 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
Pcdhb3Q91XZ7 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Pcdhb3Q91XZ7 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhb3Q91XZ7 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhb3Q91XZ7 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhb3Q91XZ7 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhb3Q91XZ7 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhb3Q91XZ7 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
Pcdhb3Q91XZ7 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhb3Q91XZ7 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
Pcdhb3Q91XZ7 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhb3Q91XZ7 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Pcdhb3Q91XZ7 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
Pcdhb3Q91XZ7 Gm20815-201ENSMUST00000115496 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhb3Q91XZ7 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhb3Q91XZ7 Atp6v1c2-207ENSMUST00000156727 1279 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhb3Q91XZ7 Gm21812-202ENSMUST00000188908 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhb3Q91XZ7 Gm43692-201ENSMUST00000198236 1062 ntBASIC13.91□□□□□ -0.18
Pcdhb3Q91XZ7 Letm2-206ENSMUST00000210234 837 ntTSL 5 BASIC13.91□□□□□ -0.18
Pcdhb3Q91XZ7 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhb3Q91XZ7 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Pcdhb3Q91XZ7 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC13.91□□□□□ -0.18
Pcdhb3Q91XZ7 CT010506.4-201ENSMUST00000225457 351 ntBASIC13.91□□□□□ -0.18
Pcdhb3Q91XZ7 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhb3Q91XZ7 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhb3Q91XZ7 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhb3Q91XZ7 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhb3Q91XZ7 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhb3Q91XZ7 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Pcdhb3Q91XZ7 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Pcdhb3Q91XZ7 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhb3Q91XZ7 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhb3Q91XZ7 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhb3Q91XZ7 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhb3Q91XZ7 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhb3Q91XZ7 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhb3Q91XZ7 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC13.91□□□□□ -0.18
Pcdhb3Q91XZ7 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhb3Q91XZ7 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Pcdhb3Q91XZ7 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhb3Q91XZ7 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.91□□□□□ -0.18
Pcdhb3Q91XZ7 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhb3Q91XZ7 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb3Q91XZ7 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb3Q91XZ7 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb3Q91XZ7 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb3Q91XZ7 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC13.9□□□□□ -0.18
Pcdhb3Q91XZ7 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Pcdhb3Q91XZ7 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb3Q91XZ7 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Pcdhb3Q91XZ7 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb3Q91XZ7 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb3Q91XZ7 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb3Q91XZ7 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb3Q91XZ7 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb3Q91XZ7 Gm13597-201ENSMUST00000121239 375 ntBASIC13.9□□□□□ -0.18
Pcdhb3Q91XZ7 Gm13299-201ENSMUST00000133644 425 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb3Q91XZ7 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb3Q91XZ7 Gm13307-202ENSMUST00000142990 425 ntTSL 5 BASIC13.9□□□□□ -0.18
Pcdhb3Q91XZ7 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC13.9□□□□□ -0.18
Pcdhb3Q91XZ7 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb3Q91XZ7 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC13.9□□□□□ -0.18
Pcdhb3Q91XZ7 Gm28722-201ENSMUST00000187630 1036 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms