Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC12.39□□□□□ -0.43
Pcdhga3Q91XY5 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Pcdhga3Q91XY5 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Pcdhga3Q91XY5 Gm13823-201ENSMUST00000119930 345 ntBASIC12.39□□□□□ -0.43
Pcdhga3Q91XY5 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhga3Q91XY5 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhga3Q91XY5 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC12.39□□□□□ -0.43
Pcdhga3Q91XY5 AA619741-201ENSMUST00000195095 646 ntBASIC12.39□□□□□ -0.43
Pcdhga3Q91XY5 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC12.39□□□□□ -0.43
Pcdhga3Q91XY5 Gm7774-201ENSMUST00000200064 533 ntBASIC12.39□□□□□ -0.43
Pcdhga3Q91XY5 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhga3Q91XY5 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhga3Q91XY5 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhga3Q91XY5 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Pcdhga3Q91XY5 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Pcdhga3Q91XY5 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC12.39□□□□□ -0.43
Pcdhga3Q91XY5 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhga3Q91XY5 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhga3Q91XY5 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhga3Q91XY5 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
Pcdhga3Q91XY5 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Pcdhga3Q91XY5 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Pcdhga3Q91XY5 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Pcdhga3Q91XY5 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC12.39□□□□□ -0.43
Pcdhga3Q91XY5 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Pcdhga3Q91XY5 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhga3Q91XY5 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhga3Q91XY5 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhga3Q91XY5 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC12.39□□□□□ -0.43
Pcdhga3Q91XY5 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhga3Q91XY5 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhga3Q91XY5 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Pcdhga3Q91XY5 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhga3Q91XY5 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhga3Q91XY5 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhga3Q91XY5 Gm38102-201ENSMUST00000192791 1935 ntBASIC12.39□□□□□ -0.43
Pcdhga3Q91XY5 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.39□□□□□ -0.43
Pcdhga3Q91XY5 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhga3Q91XY5 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Pcdhga3Q91XY5 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhga3Q91XY5 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhga3Q91XY5 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC12.38□□□□□ -0.43
Pcdhga3Q91XY5 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhga3Q91XY5 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhga3Q91XY5 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhga3Q91XY5 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhga3Q91XY5 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhga3Q91XY5 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhga3Q91XY5 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhga3Q91XY5 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC12.38□□□□□ -0.43
Pcdhga3Q91XY5 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC12.38□□□□□ -0.43
Pcdhga3Q91XY5 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhga3Q91XY5 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhga3Q91XY5 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhga3Q91XY5 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhga3Q91XY5 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhga3Q91XY5 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhga3Q91XY5 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhga3Q91XY5 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC12.38□□□□□ -0.43
Pcdhga3Q91XY5 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhga3Q91XY5 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhga3Q91XY5 Gm8584-201ENSMUST00000171982 758 ntBASIC12.38□□□□□ -0.43
Pcdhga3Q91XY5 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC12.38□□□□□ -0.43
Pcdhga3Q91XY5 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC12.38□□□□□ -0.43
Pcdhga3Q91XY5 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhga3Q91XY5 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhga3Q91XY5 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhga3Q91XY5 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhga3Q91XY5 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhga3Q91XY5 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhga3Q91XY5 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhga3Q91XY5 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Pcdhga3Q91XY5 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhga3Q91XY5 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Pcdhga3Q91XY5 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC12.37□□□□□ -0.43
Pcdhga3Q91XY5 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC12.37□□□□□ -0.43
Pcdhga3Q91XY5 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhga3Q91XY5 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhga3Q91XY5 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhga3Q91XY5 Gm9109-201ENSMUST00000120254 1405 ntBASIC12.37□□□□□ -0.43
Pcdhga3Q91XY5 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhga3Q91XY5 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhga3Q91XY5 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhga3Q91XY5 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhga3Q91XY5 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Pcdhga3Q91XY5 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Pcdhga3Q91XY5 Mmp14-206ENSMUST00000225641 3238 ntBASIC12.37□□□□□ -0.43
Pcdhga3Q91XY5 Mir449b-201ENSMUST00000104833 80 ntBASIC12.37□□□□□ -0.43
Pcdhga3Q91XY5 Gm18766-201ENSMUST00000189811 808 ntBASIC12.37□□□□□ -0.43
Pcdhga3Q91XY5 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhga3Q91XY5 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhga3Q91XY5 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Pcdhga3Q91XY5 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Pcdhga3Q91XY5 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Pcdhga3Q91XY5 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Pcdhga3Q91XY5 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Pcdhga3Q91XY5 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhga3Q91XY5 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhga3Q91XY5 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhga3Q91XY5 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 66.4 ms