Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trex1Q91XB0 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trex1Q91XB0 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trex1Q91XB0 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trex1Q91XB0 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trex1Q91XB0 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trex1Q91XB0 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Trex1Q91XB0 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trex1Q91XB0 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trex1Q91XB0 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trex1Q91XB0 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC15.81■□□□□ 0.12
Trex1Q91XB0 Trav4d-2-201ENSMUST00000120914 335 ntBASIC15.81■□□□□ 0.12
Trex1Q91XB0 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trex1Q91XB0 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trex1Q91XB0 Gm8810-201ENSMUST00000172895 754 ntBASIC15.81■□□□□ 0.12
Trex1Q91XB0 Proscos-202ENSMUST00000178990 666 ntBASIC15.81■□□□□ 0.12
Trex1Q91XB0 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC15.81■□□□□ 0.12
Trex1Q91XB0 Gm43598-201ENSMUST00000202482 2479 ntBASIC15.81■□□□□ 0.12
Trex1Q91XB0 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC15.81■□□□□ 0.12
Trex1Q91XB0 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trex1Q91XB0 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trex1Q91XB0 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trex1Q91XB0 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trex1Q91XB0 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trex1Q91XB0 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trex1Q91XB0 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Trex1Q91XB0 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trex1Q91XB0 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trex1Q91XB0 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trex1Q91XB0 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Trex1Q91XB0 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trex1Q91XB0 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trex1Q91XB0 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trex1Q91XB0 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trex1Q91XB0 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC15.8■□□□□ 0.12
Trex1Q91XB0 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Trex1Q91XB0 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trex1Q91XB0 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trex1Q91XB0 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trex1Q91XB0 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trex1Q91XB0 Gm15770-201ENSMUST00000117498 584 ntBASIC15.8■□□□□ 0.12
Trex1Q91XB0 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC15.8■□□□□ 0.12
Trex1Q91XB0 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trex1Q91XB0 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC15.8■□□□□ 0.12
Trex1Q91XB0 Gm40466-201ENSMUST00000212174 422 ntBASIC15.8■□□□□ 0.12
Trex1Q91XB0 Gm17870-201ENSMUST00000219489 1174 ntBASIC15.8■□□□□ 0.12
Trex1Q91XB0 Gm10478-201ENSMUST00000084451 396 ntBASIC15.8■□□□□ 0.12
Trex1Q91XB0 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Trex1Q91XB0 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trex1Q91XB0 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trex1Q91XB0 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trex1Q91XB0 Gm20632-201ENSMUST00000176760 2427 ntBASIC15.8■□□□□ 0.12
Trex1Q91XB0 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
Trex1Q91XB0 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trex1Q91XB0 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trex1Q91XB0 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trex1Q91XB0 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trex1Q91XB0 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trex1Q91XB0 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC15.8■□□□□ 0.12
Trex1Q91XB0 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Trex1Q91XB0 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trex1Q91XB0 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trex1Q91XB0 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trex1Q91XB0 Gm45605-201ENSMUST00000210265 4269 ntBASIC15.8■□□□□ 0.12
Trex1Q91XB0 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trex1Q91XB0 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trex1Q91XB0 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC15.79■□□□□ 0.12
Trex1Q91XB0 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trex1Q91XB0 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trex1Q91XB0 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trex1Q91XB0 Gm12620-201ENSMUST00000119791 1986 ntBASIC15.79■□□□□ 0.12
Trex1Q91XB0 Gm12612-201ENSMUST00000140182 1986 ntBASIC15.79■□□□□ 0.12
Trex1Q91XB0 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trex1Q91XB0 Gm17420-201ENSMUST00000164753 153 ntBASIC15.79■□□□□ 0.12
Trex1Q91XB0 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Trex1Q91XB0 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trex1Q91XB0 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC15.79■□□□□ 0.12
Trex1Q91XB0 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC15.79■□□□□ 0.12
Trex1Q91XB0 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trex1Q91XB0 Gm42693-201ENSMUST00000196779 631 ntBASIC15.79■□□□□ 0.12
Trex1Q91XB0 Gm17330-201ENSMUST00000221047 165 ntBASIC15.79■□□□□ 0.12
Trex1Q91XB0 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trex1Q91XB0 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trex1Q91XB0 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trex1Q91XB0 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trex1Q91XB0 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trex1Q91XB0 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trex1Q91XB0 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trex1Q91XB0 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC15.79■□□□□ 0.12
Trex1Q91XB0 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trex1Q91XB0 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC15.79■□□□□ 0.12
Trex1Q91XB0 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trex1Q91XB0 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trex1Q91XB0 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trex1Q91XB0 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trex1Q91XB0 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trex1Q91XB0 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trex1Q91XB0 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trex1Q91XB0 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC15.78■□□□□ 0.12
Trex1Q91XB0 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms