Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vsx1Q91V10 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vsx1Q91V10 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vsx1Q91V10 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vsx1Q91V10 Gm7553-201ENSMUST00000185805 1426 ntBASIC13.68□□□□□ -0.22
Vsx1Q91V10 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.68□□□□□ -0.22
Vsx1Q91V10 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC13.68□□□□□ -0.22
Vsx1Q91V10 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Vsx1Q91V10 Rn7s1-201ENSMUST00000174924 300 ntBASIC13.68□□□□□ -0.22
Vsx1Q91V10 Rn7s2-201ENSMUST00000175032 300 ntBASIC13.68□□□□□ -0.22
Vsx1Q91V10 Gm26461-201ENSMUST00000175064 290 ntBASIC13.68□□□□□ -0.22
Vsx1Q91V10 Gm43822-201ENSMUST00000200285 476 ntBASIC13.68□□□□□ -0.22
Vsx1Q91V10 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC13.68□□□□□ -0.22
Vsx1Q91V10 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC13.68□□□□□ -0.22
Vsx1Q91V10 Gm18905-201ENSMUST00000205454 928 ntBASIC13.68□□□□□ -0.22
Vsx1Q91V10 Gm18934-201ENSMUST00000216671 1044 ntBASIC13.68□□□□□ -0.22
Vsx1Q91V10 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC13.68□□□□□ -0.22
Vsx1Q91V10 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vsx1Q91V10 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vsx1Q91V10 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Vsx1Q91V10 Gm38058-201ENSMUST00000194323 4368 ntBASIC13.68□□□□□ -0.22
Vsx1Q91V10 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vsx1Q91V10 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vsx1Q91V10 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vsx1Q91V10 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vsx1Q91V10 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vsx1Q91V10 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vsx1Q91V10 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vsx1Q91V10 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vsx1Q91V10 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vsx1Q91V10 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vsx1Q91V10 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Vsx1Q91V10 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vsx1Q91V10 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vsx1Q91V10 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Vsx1Q91V10 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vsx1Q91V10 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vsx1Q91V10 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Vsx1Q91V10 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Vsx1Q91V10 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vsx1Q91V10 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vsx1Q91V10 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.67□□□□□ -0.22
Vsx1Q91V10 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vsx1Q91V10 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vsx1Q91V10 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vsx1Q91V10 Gm13612-201ENSMUST00000119276 390 ntBASIC13.67□□□□□ -0.22
Vsx1Q91V10 Gm16177-201ENSMUST00000120728 718 ntBASIC13.67□□□□□ -0.22
Vsx1Q91V10 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC13.67□□□□□ -0.22
Vsx1Q91V10 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC13.67□□□□□ -0.22
Vsx1Q91V10 Gm27516-201ENSMUST00000184237 98 ntBASIC13.67□□□□□ -0.22
Vsx1Q91V10 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC13.67□□□□□ -0.22
Vsx1Q91V10 Gm3786-201ENSMUST00000202659 378 ntBASIC13.67□□□□□ -0.22
Vsx1Q91V10 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vsx1Q91V10 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vsx1Q91V10 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vsx1Q91V10 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vsx1Q91V10 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vsx1Q91V10 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Vsx1Q91V10 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Vsx1Q91V10 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vsx1Q91V10 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13.67□□□□□ -0.22
Vsx1Q91V10 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Vsx1Q91V10 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vsx1Q91V10 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Vsx1Q91V10 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Vsx1Q91V10 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vsx1Q91V10 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vsx1Q91V10 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vsx1Q91V10 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Vsx1Q91V10 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC13.66□□□□□ -0.22
Vsx1Q91V10 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.66□□□□□ -0.22
Vsx1Q91V10 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
Vsx1Q91V10 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vsx1Q91V10 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Vsx1Q91V10 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC13.66□□□□□ -0.22
Vsx1Q91V10 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Vsx1Q91V10 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vsx1Q91V10 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13.66□□□□□ -0.22
Vsx1Q91V10 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vsx1Q91V10 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Vsx1Q91V10 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vsx1Q91V10 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Vsx1Q91V10 Gm15957-201ENSMUST00000118893 974 ntBASIC13.66□□□□□ -0.22
Vsx1Q91V10 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC13.66□□□□□ -0.22
Vsx1Q91V10 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Vsx1Q91V10 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vsx1Q91V10 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vsx1Q91V10 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Vsx1Q91V10 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Vsx1Q91V10 Gm38671-201ENSMUST00000200573 130 ntBASIC13.66□□□□□ -0.22
Vsx1Q91V10 Gm43818-201ENSMUST00000200605 466 ntBASIC13.66□□□□□ -0.22
Vsx1Q91V10 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Vsx1Q91V10 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vsx1Q91V10 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Vsx1Q91V10 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vsx1Q91V10 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC13.66□□□□□ -0.22
Vsx1Q91V10 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vsx1Q91V10 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vsx1Q91V10 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vsx1Q91V10 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms