Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
H1fooQ8VIK3 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
H1fooQ8VIK3 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
H1fooQ8VIK3 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC11.62□□□□□ -0.55
H1fooQ8VIK3 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
H1fooQ8VIK3 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
H1fooQ8VIK3 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
H1fooQ8VIK3 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
H1fooQ8VIK3 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
H1fooQ8VIK3 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
H1fooQ8VIK3 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
H1fooQ8VIK3 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
H1fooQ8VIK3 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
H1fooQ8VIK3 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC11.62□□□□□ -0.55
H1fooQ8VIK3 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
H1fooQ8VIK3 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
H1fooQ8VIK3 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
H1fooQ8VIK3 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
H1fooQ8VIK3 Gm24543-201ENSMUST00000103867 82 ntBASIC11.62□□□□□ -0.55
H1fooQ8VIK3 Mir449b-201ENSMUST00000104833 80 ntBASIC11.62□□□□□ -0.55
H1fooQ8VIK3 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
H1fooQ8VIK3 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
H1fooQ8VIK3 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC11.62□□□□□ -0.55
H1fooQ8VIK3 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
H1fooQ8VIK3 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC11.62□□□□□ -0.55
H1fooQ8VIK3 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC11.62□□□□□ -0.55
H1fooQ8VIK3 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC11.62□□□□□ -0.55
H1fooQ8VIK3 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
H1fooQ8VIK3 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC11.62□□□□□ -0.55
H1fooQ8VIK3 Ighv1-25-201ENSMUST00000195638 345 ntBASIC11.62□□□□□ -0.55
H1fooQ8VIK3 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC11.62□□□□□ -0.55
H1fooQ8VIK3 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
H1fooQ8VIK3 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
H1fooQ8VIK3 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC11.62□□□□□ -0.55
H1fooQ8VIK3 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
H1fooQ8VIK3 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
H1fooQ8VIK3 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
H1fooQ8VIK3 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
H1fooQ8VIK3 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC11.62□□□□□ -0.55
H1fooQ8VIK3 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
H1fooQ8VIK3 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
H1fooQ8VIK3 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC11.62□□□□□ -0.55
H1fooQ8VIK3 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
H1fooQ8VIK3 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC11.62□□□□□ -0.55
H1fooQ8VIK3 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
H1fooQ8VIK3 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
H1fooQ8VIK3 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
H1fooQ8VIK3 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
H1fooQ8VIK3 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
H1fooQ8VIK3 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
H1fooQ8VIK3 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
H1fooQ8VIK3 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
H1fooQ8VIK3 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
H1fooQ8VIK3 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC11.61□□□□□ -0.55
H1fooQ8VIK3 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
H1fooQ8VIK3 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
H1fooQ8VIK3 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
H1fooQ8VIK3 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
H1fooQ8VIK3 Gm6415-201ENSMUST00000118488 348 ntBASIC11.61□□□□□ -0.55
H1fooQ8VIK3 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
H1fooQ8VIK3 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
H1fooQ8VIK3 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
H1fooQ8VIK3 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
H1fooQ8VIK3 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC11.61□□□□□ -0.55
H1fooQ8VIK3 AC121804.3-201ENSMUST00000223420 295 ntBASIC11.61□□□□□ -0.55
H1fooQ8VIK3 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
H1fooQ8VIK3 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
H1fooQ8VIK3 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
H1fooQ8VIK3 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
H1fooQ8VIK3 Il17rd-203ENSMUST00000225146 3366 ntBASIC11.61□□□□□ -0.55
H1fooQ8VIK3 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
H1fooQ8VIK3 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
H1fooQ8VIK3 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
H1fooQ8VIK3 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
H1fooQ8VIK3 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
H1fooQ8VIK3 Gm42872-201ENSMUST00000200026 1967 ntBASIC11.61□□□□□ -0.55
H1fooQ8VIK3 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
H1fooQ8VIK3 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
H1fooQ8VIK3 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
H1fooQ8VIK3 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
H1fooQ8VIK3 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
H1fooQ8VIK3 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
H1fooQ8VIK3 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
H1fooQ8VIK3 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
H1fooQ8VIK3 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC11.61□□□□□ -0.55
H1fooQ8VIK3 Gm45667-201ENSMUST00000210380 1316 ntBASIC11.6□□□□□ -0.55
H1fooQ8VIK3 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC11.6□□□□□ -0.55
H1fooQ8VIK3 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
H1fooQ8VIK3 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
H1fooQ8VIK3 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC11.6□□□□□ -0.55
H1fooQ8VIK3 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
H1fooQ8VIK3 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
H1fooQ8VIK3 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
H1fooQ8VIK3 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC11.6□□□□□ -0.55
H1fooQ8VIK3 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
H1fooQ8VIK3 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
H1fooQ8VIK3 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
H1fooQ8VIK3 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
H1fooQ8VIK3 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC11.6□□□□□ -0.55
H1fooQ8VIK3 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms