Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Gm10290-201ENSMUST00000200451 999 ntBASIC13.39□□□□□ -0.27
Pcdh18Q8VHR0 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC13.39□□□□□ -0.27
Pcdh18Q8VHR0 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh18Q8VHR0 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh18Q8VHR0 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh18Q8VHR0 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh18Q8VHR0 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
Pcdh18Q8VHR0 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.39□□□□□ -0.27
Pcdh18Q8VHR0 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh18Q8VHR0 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC13.39□□□□□ -0.27
Pcdh18Q8VHR0 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh18Q8VHR0 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Pcdh18Q8VHR0 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh18Q8VHR0 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh18Q8VHR0 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Pcdh18Q8VHR0 Gm13233-201ENSMUST00000118760 1443 ntBASIC13.39□□□□□ -0.27
Pcdh18Q8VHR0 Gm13244-201ENSMUST00000118855 1446 ntBASIC13.39□□□□□ -0.27
Pcdh18Q8VHR0 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Pcdh18Q8VHR0 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh18Q8VHR0 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh18Q8VHR0 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC13.38□□□□□ -0.27
Pcdh18Q8VHR0 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Pcdh18Q8VHR0 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Pcdh18Q8VHR0 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh18Q8VHR0 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh18Q8VHR0 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC13.38□□□□□ -0.27
Pcdh18Q8VHR0 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh18Q8VHR0 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Pcdh18Q8VHR0 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh18Q8VHR0 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh18Q8VHR0 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Pcdh18Q8VHR0 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
Pcdh18Q8VHR0 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh18Q8VHR0 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh18Q8VHR0 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC13.38□□□□□ -0.27
Pcdh18Q8VHR0 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC13.38□□□□□ -0.27
Pcdh18Q8VHR0 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh18Q8VHR0 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh18Q8VHR0 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh18Q8VHR0 Olfr286-202ENSMUST00000205305 969 ntBASIC13.38□□□□□ -0.27
Pcdh18Q8VHR0 AC155729.1-201ENSMUST00000227758 544 ntBASIC13.38□□□□□ -0.27
Pcdh18Q8VHR0 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh18Q8VHR0 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh18Q8VHR0 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh18Q8VHR0 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh18Q8VHR0 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh18Q8VHR0 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Pcdh18Q8VHR0 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.38□□□□□ -0.27
Pcdh18Q8VHR0 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh18Q8VHR0 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh18Q8VHR0 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh18Q8VHR0 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh18Q8VHR0 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Pcdh18Q8VHR0 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh18Q8VHR0 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh18Q8VHR0 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh18Q8VHR0 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh18Q8VHR0 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh18Q8VHR0 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh18Q8VHR0 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh18Q8VHR0 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh18Q8VHR0 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh18Q8VHR0 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh18Q8VHR0 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh18Q8VHR0 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh18Q8VHR0 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Pcdh18Q8VHR0 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh18Q8VHR0 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh18Q8VHR0 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Pcdh18Q8VHR0 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh18Q8VHR0 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh18Q8VHR0 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh18Q8VHR0 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh18Q8VHR0 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
Pcdh18Q8VHR0 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC13.37□□□□□ -0.27
Pcdh18Q8VHR0 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC13.37□□□□□ -0.27
Pcdh18Q8VHR0 Gm1401-201ENSMUST00000122048 772 ntBASIC13.37□□□□□ -0.27
Pcdh18Q8VHR0 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC13.37□□□□□ -0.27
Pcdh18Q8VHR0 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh18Q8VHR0 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC13.37□□□□□ -0.27
Pcdh18Q8VHR0 Gm9182-201ENSMUST00000217829 639 ntBASIC13.37□□□□□ -0.27
Pcdh18Q8VHR0 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC13.37□□□□□ -0.27
Pcdh18Q8VHR0 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh18Q8VHR0 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh18Q8VHR0 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh18Q8VHR0 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC13.37□□□□□ -0.27
Pcdh18Q8VHR0 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh18Q8VHR0 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh18Q8VHR0 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh18Q8VHR0 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh18Q8VHR0 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh18Q8VHR0 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Pcdh18Q8VHR0 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh18Q8VHR0 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Pcdh18Q8VHR0 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh18Q8VHR0 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh18Q8VHR0 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh18Q8VHR0 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh18Q8VHR0 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Pcdh18Q8VHR0 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms