Protein–RNA interactions for Protein: Q8VEJ9

Vps4a, Vacuolar protein sorting-associated protein 4A, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4aQ8VEJ9 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps4aQ8VEJ9 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Vps4aQ8VEJ9 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Vps4aQ8VEJ9 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.5□□□□□ -0.25
Vps4aQ8VEJ9 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps4aQ8VEJ9 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Vps4aQ8VEJ9 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps4aQ8VEJ9 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Vps4aQ8VEJ9 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Vps4aQ8VEJ9 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC13.5□□□□□ -0.25
Vps4aQ8VEJ9 Gm7730-201ENSMUST00000212486 454 ntBASIC13.5□□□□□ -0.25
Vps4aQ8VEJ9 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps4aQ8VEJ9 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps4aQ8VEJ9 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Vps4aQ8VEJ9 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps4aQ8VEJ9 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Vps4aQ8VEJ9 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.5□□□□□ -0.25
Vps4aQ8VEJ9 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps4aQ8VEJ9 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps4aQ8VEJ9 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps4aQ8VEJ9 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Vps4aQ8VEJ9 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Vps4aQ8VEJ9 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps4aQ8VEJ9 AC166491.1-201ENSMUST00000227053 2308 ntBASIC13.5□□□□□ -0.25
Vps4aQ8VEJ9 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC13.5□□□□□ -0.25
Vps4aQ8VEJ9 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vps4aQ8VEJ9 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC13.49□□□□□ -0.25
Vps4aQ8VEJ9 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.49□□□□□ -0.25
Vps4aQ8VEJ9 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Vps4aQ8VEJ9 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vps4aQ8VEJ9 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Vps4aQ8VEJ9 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Vps4aQ8VEJ9 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Vps4aQ8VEJ9 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Vps4aQ8VEJ9 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vps4aQ8VEJ9 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vps4aQ8VEJ9 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC13.49□□□□□ -0.25
Vps4aQ8VEJ9 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC13.49□□□□□ -0.25
Vps4aQ8VEJ9 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC13.49□□□□□ -0.25
Vps4aQ8VEJ9 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Vps4aQ8VEJ9 Gm38225-201ENSMUST00000194001 393 ntBASIC13.49□□□□□ -0.25
Vps4aQ8VEJ9 Gm18187-201ENSMUST00000196476 984 ntBASIC13.49□□□□□ -0.25
Vps4aQ8VEJ9 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Vps4aQ8VEJ9 Gm7653-201ENSMUST00000214567 508 ntBASIC13.49□□□□□ -0.25
Vps4aQ8VEJ9 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Vps4aQ8VEJ9 Gm6888-201ENSMUST00000221983 706 ntBASIC13.49□□□□□ -0.25
Vps4aQ8VEJ9 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vps4aQ8VEJ9 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC13.49□□□□□ -0.25
Vps4aQ8VEJ9 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Vps4aQ8VEJ9 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vps4aQ8VEJ9 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vps4aQ8VEJ9 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC13.49□□□□□ -0.25
Vps4aQ8VEJ9 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Vps4aQ8VEJ9 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC13.49□□□□□ -0.25
Vps4aQ8VEJ9 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vps4aQ8VEJ9 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vps4aQ8VEJ9 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vps4aQ8VEJ9 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Vps4aQ8VEJ9 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC13.49□□□□□ -0.25
Vps4aQ8VEJ9 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Vps4aQ8VEJ9 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vps4aQ8VEJ9 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vps4aQ8VEJ9 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Vps4aQ8VEJ9 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vps4aQ8VEJ9 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vps4aQ8VEJ9 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vps4aQ8VEJ9 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.48□□□□□ -0.25
Vps4aQ8VEJ9 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vps4aQ8VEJ9 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vps4aQ8VEJ9 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vps4aQ8VEJ9 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vps4aQ8VEJ9 Gm6159-201ENSMUST00000191249 1724 ntBASIC13.48□□□□□ -0.25
Vps4aQ8VEJ9 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vps4aQ8VEJ9 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vps4aQ8VEJ9 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vps4aQ8VEJ9 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Vps4aQ8VEJ9 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Vps4aQ8VEJ9 Gm6973-201ENSMUST00000117080 721 ntBASIC13.48□□□□□ -0.25
Vps4aQ8VEJ9 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC13.48□□□□□ -0.25
Vps4aQ8VEJ9 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Vps4aQ8VEJ9 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Vps4aQ8VEJ9 Gm43433-201ENSMUST00000196573 481 ntBASIC13.48□□□□□ -0.25
Vps4aQ8VEJ9 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vps4aQ8VEJ9 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vps4aQ8VEJ9 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vps4aQ8VEJ9 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Vps4aQ8VEJ9 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vps4aQ8VEJ9 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Vps4aQ8VEJ9 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Vps4aQ8VEJ9 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vps4aQ8VEJ9 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vps4aQ8VEJ9 Syt7-205ENSMUST00000224135 1557 ntBASIC13.48□□□□□ -0.25
Vps4aQ8VEJ9 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vps4aQ8VEJ9 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vps4aQ8VEJ9 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vps4aQ8VEJ9 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vps4aQ8VEJ9 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Vps4aQ8VEJ9 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vps4aQ8VEJ9 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Vps4aQ8VEJ9 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 73.9 ms