Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rpa1Q8VEE4 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rpa1Q8VEE4 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Rpa1Q8VEE4 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rpa1Q8VEE4 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Rpa1Q8VEE4 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Rpa1Q8VEE4 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Rpa1Q8VEE4 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Rpa1Q8VEE4 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC13.98□□□□□ -0.17
Rpa1Q8VEE4 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Rpa1Q8VEE4 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Rpa1Q8VEE4 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Rpa1Q8VEE4 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rpa1Q8VEE4 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC13.98□□□□□ -0.17
Rpa1Q8VEE4 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC13.98□□□□□ -0.17
Rpa1Q8VEE4 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Rpa1Q8VEE4 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC13.98□□□□□ -0.17
Rpa1Q8VEE4 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC13.98□□□□□ -0.17
Rpa1Q8VEE4 Gm42670-201ENSMUST00000201816 1292 ntBASIC13.98□□□□□ -0.17
Rpa1Q8VEE4 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rpa1Q8VEE4 Gm9449-201ENSMUST00000207265 1011 ntBASIC13.98□□□□□ -0.17
Rpa1Q8VEE4 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC13.98□□□□□ -0.17
Rpa1Q8VEE4 AV026068-213ENSMUST00000223675 1171 ntBASIC13.98□□□□□ -0.17
Rpa1Q8VEE4 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rpa1Q8VEE4 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rpa1Q8VEE4 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.98□□□□□ -0.17
Rpa1Q8VEE4 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rpa1Q8VEE4 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Rpa1Q8VEE4 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Rpa1Q8VEE4 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC13.98□□□□□ -0.17
Rpa1Q8VEE4 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rpa1Q8VEE4 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rpa1Q8VEE4 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rpa1Q8VEE4 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Rpa1Q8VEE4 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rpa1Q8VEE4 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC13.98□□□□□ -0.17
Rpa1Q8VEE4 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rpa1Q8VEE4 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rpa1Q8VEE4 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rpa1Q8VEE4 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rpa1Q8VEE4 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Rpa1Q8VEE4 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Rpa1Q8VEE4 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rpa1Q8VEE4 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rpa1Q8VEE4 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Rpa1Q8VEE4 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rpa1Q8VEE4 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rpa1Q8VEE4 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rpa1Q8VEE4 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Rpa1Q8VEE4 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Rpa1Q8VEE4 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rpa1Q8VEE4 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Rpa1Q8VEE4 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rpa1Q8VEE4 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rpa1Q8VEE4 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rpa1Q8VEE4 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rpa1Q8VEE4 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
Rpa1Q8VEE4 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC13.97□□□□□ -0.17
Rpa1Q8VEE4 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rpa1Q8VEE4 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rpa1Q8VEE4 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Rpa1Q8VEE4 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC13.97□□□□□ -0.17
Rpa1Q8VEE4 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC13.97□□□□□ -0.17
Rpa1Q8VEE4 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Rpa1Q8VEE4 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC13.97□□□□□ -0.17
Rpa1Q8VEE4 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC13.97□□□□□ -0.17
Rpa1Q8VEE4 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC13.97□□□□□ -0.17
Rpa1Q8VEE4 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rpa1Q8VEE4 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rpa1Q8VEE4 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rpa1Q8VEE4 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Rpa1Q8VEE4 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC13.97□□□□□ -0.17
Rpa1Q8VEE4 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC13.97□□□□□ -0.17
Rpa1Q8VEE4 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Rpa1Q8VEE4 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rpa1Q8VEE4 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Rpa1Q8VEE4 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rpa1Q8VEE4 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Rpa1Q8VEE4 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rpa1Q8VEE4 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rpa1Q8VEE4 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Rpa1Q8VEE4 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rpa1Q8VEE4 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC13.96□□□□□ -0.17
Rpa1Q8VEE4 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rpa1Q8VEE4 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Rpa1Q8VEE4 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Rpa1Q8VEE4 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rpa1Q8VEE4 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Rpa1Q8VEE4 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rpa1Q8VEE4 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rpa1Q8VEE4 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC13.96□□□□□ -0.17
Rpa1Q8VEE4 Gm6184-201ENSMUST00000120403 1261 ntBASIC13.96□□□□□ -0.17
Rpa1Q8VEE4 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC13.96□□□□□ -0.17
Rpa1Q8VEE4 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC13.96□□□□□ -0.17
Rpa1Q8VEE4 Mzt1-203ENSMUST00000227948 952 ntBASIC13.96□□□□□ -0.17
Rpa1Q8VEE4 AC123645.1-201ENSMUST00000228469 605 ntBASIC13.96□□□□□ -0.17
Rpa1Q8VEE4 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rpa1Q8VEE4 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Rpa1Q8VEE4 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Rpa1Q8VEE4 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms