Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rprd1aQ8VDS4 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rprd1aQ8VDS4 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rprd1aQ8VDS4 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rprd1aQ8VDS4 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rprd1aQ8VDS4 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rprd1aQ8VDS4 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rprd1aQ8VDS4 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rprd1aQ8VDS4 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Rprd1aQ8VDS4 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Rprd1aQ8VDS4 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Rprd1aQ8VDS4 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.27□□□□□ -0.12
Rprd1aQ8VDS4 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC14.27□□□□□ -0.12
Rprd1aQ8VDS4 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rprd1aQ8VDS4 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rprd1aQ8VDS4 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rprd1aQ8VDS4 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rprd1aQ8VDS4 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rprd1aQ8VDS4 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rprd1aQ8VDS4 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rprd1aQ8VDS4 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.27□□□□□ -0.12
Rprd1aQ8VDS4 Gm13127-201ENSMUST00000118978 1389 ntBASIC14.27□□□□□ -0.12
Rprd1aQ8VDS4 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rprd1aQ8VDS4 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Rprd1aQ8VDS4 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC14.27□□□□□ -0.13
Rprd1aQ8VDS4 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC14.27□□□□□ -0.13
Rprd1aQ8VDS4 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rprd1aQ8VDS4 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC14.27□□□□□ -0.13
Rprd1aQ8VDS4 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC14.27□□□□□ -0.13
Rprd1aQ8VDS4 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rprd1aQ8VDS4 Gm28760-201ENSMUST00000185995 736 ntBASIC14.27□□□□□ -0.13
Rprd1aQ8VDS4 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC14.27□□□□□ -0.13
Rprd1aQ8VDS4 Gm29741-201ENSMUST00000192667 421 ntBASIC14.27□□□□□ -0.13
Rprd1aQ8VDS4 Ighv1-51-201ENSMUST00000192903 354 ntBASIC14.27□□□□□ -0.13
Rprd1aQ8VDS4 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rprd1aQ8VDS4 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC14.27□□□□□ -0.13
Rprd1aQ8VDS4 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rprd1aQ8VDS4 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rprd1aQ8VDS4 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rprd1aQ8VDS4 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rprd1aQ8VDS4 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC14.27□□□□□ -0.13
Rprd1aQ8VDS4 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rprd1aQ8VDS4 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rprd1aQ8VDS4 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Rprd1aQ8VDS4 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rprd1aQ8VDS4 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rprd1aQ8VDS4 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rprd1aQ8VDS4 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC14.27□□□□□ -0.13
Rprd1aQ8VDS4 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.13
Rprd1aQ8VDS4 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Rprd1aQ8VDS4 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.13
Rprd1aQ8VDS4 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC14.27□□□□□ -0.13
Rprd1aQ8VDS4 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rprd1aQ8VDS4 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rprd1aQ8VDS4 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rprd1aQ8VDS4 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rprd1aQ8VDS4 Gm14452-201ENSMUST00000118680 1632 ntBASIC14.26□□□□□ -0.13
Rprd1aQ8VDS4 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rprd1aQ8VDS4 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Rprd1aQ8VDS4 Ldb3-207ENSMUST00000227819 1499 ntBASIC14.26□□□□□ -0.13
Rprd1aQ8VDS4 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rprd1aQ8VDS4 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rprd1aQ8VDS4 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rprd1aQ8VDS4 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rprd1aQ8VDS4 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rprd1aQ8VDS4 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rprd1aQ8VDS4 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rprd1aQ8VDS4 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC14.26□□□□□ -0.13
Rprd1aQ8VDS4 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC14.26□□□□□ -0.13
Rprd1aQ8VDS4 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rprd1aQ8VDS4 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rprd1aQ8VDS4 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rprd1aQ8VDS4 Gm22189-201ENSMUST00000103822 86 ntBASIC14.26□□□□□ -0.13
Rprd1aQ8VDS4 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC14.26□□□□□ -0.13
Rprd1aQ8VDS4 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC14.26□□□□□ -0.13
Rprd1aQ8VDS4 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC14.26□□□□□ -0.13
Rprd1aQ8VDS4 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rprd1aQ8VDS4 Gm7063-201ENSMUST00000186840 981 ntBASIC14.26□□□□□ -0.13
Rprd1aQ8VDS4 Gm42612-201ENSMUST00000197986 623 ntBASIC14.26□□□□□ -0.13
Rprd1aQ8VDS4 Gm43170-201ENSMUST00000199827 612 ntBASIC14.26□□□□□ -0.13
Rprd1aQ8VDS4 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Rprd1aQ8VDS4 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rprd1aQ8VDS4 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rprd1aQ8VDS4 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rprd1aQ8VDS4 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rprd1aQ8VDS4 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rprd1aQ8VDS4 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rprd1aQ8VDS4 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Rprd1aQ8VDS4 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Rprd1aQ8VDS4 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Rprd1aQ8VDS4 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC14.26□□□□□ -0.13
Rprd1aQ8VDS4 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rprd1aQ8VDS4 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rprd1aQ8VDS4 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Rprd1aQ8VDS4 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rprd1aQ8VDS4 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rprd1aQ8VDS4 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Rprd1aQ8VDS4 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rprd1aQ8VDS4 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rprd1aQ8VDS4 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms