Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Gm18905-201ENSMUST00000205454 928 ntBASIC15.2■□□□□ 0.02
Rpap2Q8VC34 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC15.2■□□□□ 0.02
Rpap2Q8VC34 Wdyhv1-203ENSMUST00000226889 394 ntBASIC15.2■□□□□ 0.02
Rpap2Q8VC34 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rpap2Q8VC34 Gm20445-201ENSMUST00000061905 565 ntBASIC15.2■□□□□ 0.02
Rpap2Q8VC34 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rpap2Q8VC34 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC15.2■□□□□ 0.02
Rpap2Q8VC34 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rpap2Q8VC34 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rpap2Q8VC34 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rpap2Q8VC34 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rpap2Q8VC34 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rpap2Q8VC34 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rpap2Q8VC34 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC15.2■□□□□ 0.02
Rpap2Q8VC34 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC15.2■□□□□ 0.02
Rpap2Q8VC34 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rpap2Q8VC34 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Rpap2Q8VC34 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rpap2Q8VC34 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rpap2Q8VC34 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rpap2Q8VC34 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rpap2Q8VC34 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Rpap2Q8VC34 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rpap2Q8VC34 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rpap2Q8VC34 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC15.19■□□□□ 0.02
Rpap2Q8VC34 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rpap2Q8VC34 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rpap2Q8VC34 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rpap2Q8VC34 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rpap2Q8VC34 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rpap2Q8VC34 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC15.19■□□□□ 0.02
Rpap2Q8VC34 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rpap2Q8VC34 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC15.19■□□□□ 0.02
Rpap2Q8VC34 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rpap2Q8VC34 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
Rpap2Q8VC34 Gm24694-201ENSMUST00000180054 110 ntBASIC15.19■□□□□ 0.02
Rpap2Q8VC34 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rpap2Q8VC34 Gm27663-201ENSMUST00000184839 110 ntBASIC15.19■□□□□ 0.02
Rpap2Q8VC34 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rpap2Q8VC34 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rpap2Q8VC34 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rpap2Q8VC34 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Rpap2Q8VC34 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rpap2Q8VC34 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rpap2Q8VC34 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rpap2Q8VC34 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rpap2Q8VC34 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC15.19■□□□□ 0.02
Rpap2Q8VC34 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Rpap2Q8VC34 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rpap2Q8VC34 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rpap2Q8VC34 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rpap2Q8VC34 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rpap2Q8VC34 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rpap2Q8VC34 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rpap2Q8VC34 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rpap2Q8VC34 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Rpap2Q8VC34 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rpap2Q8VC34 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC15.18■□□□□ 0.02
Rpap2Q8VC34 Ksr1-207ENSMUST00000226282 5260 ntBASIC15.18■□□□□ 0.02
Rpap2Q8VC34 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Rpap2Q8VC34 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rpap2Q8VC34 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rpap2Q8VC34 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rpap2Q8VC34 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC15.18■□□□□ 0.02
Rpap2Q8VC34 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
Rpap2Q8VC34 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rpap2Q8VC34 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rpap2Q8VC34 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rpap2Q8VC34 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC15.18■□□□□ 0.02
Rpap2Q8VC34 Auts2-212ENSMUST00000178555 309 ntBASIC15.18■□□□□ 0.02
Rpap2Q8VC34 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Rpap2Q8VC34 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rpap2Q8VC34 AC165157.4-201ENSMUST00000220587 139 ntBASIC15.18■□□□□ 0.02
Rpap2Q8VC34 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rpap2Q8VC34 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rpap2Q8VC34 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC15.18■□□□□ 0.02
Rpap2Q8VC34 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rpap2Q8VC34 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rpap2Q8VC34 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rpap2Q8VC34 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rpap2Q8VC34 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rpap2Q8VC34 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rpap2Q8VC34 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rpap2Q8VC34 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rpap2Q8VC34 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rpap2Q8VC34 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rpap2Q8VC34 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rpap2Q8VC34 Syt7-204ENSMUST00000223586 1344 ntBASIC15.17■□□□□ 0.02
Rpap2Q8VC34 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rpap2Q8VC34 Gm13859-201ENSMUST00000119936 1423 ntBASIC15.17■□□□□ 0.02
Rpap2Q8VC34 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rpap2Q8VC34 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rpap2Q8VC34 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rpap2Q8VC34 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rpap2Q8VC34 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rpap2Q8VC34 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rpap2Q8VC34 Gm14057-201ENSMUST00000120631 482 ntBASIC15.17■□□□□ 0.02
Rpap2Q8VC34 Gm15321-201ENSMUST00000121290 288 ntBASIC15.17■□□□□ 0.02
Rpap2Q8VC34 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC15.17■□□□□ 0.02
Rpap2Q8VC34 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms