Protein–RNA interactions for Protein: Q8R317

Ubqln1, Ubiquilin-1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln1Q8R317 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ubqln1Q8R317 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ubqln1Q8R317 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Ubqln1Q8R317 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ubqln1Q8R317 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ubqln1Q8R317 AC159621.2-201ENSMUST00000223519 1326 ntBASIC13.16□□□□□ -0.3
Ubqln1Q8R317 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ubqln1Q8R317 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ubqln1Q8R317 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ubqln1Q8R317 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ubqln1Q8R317 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ubqln1Q8R317 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Ubqln1Q8R317 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ubqln1Q8R317 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ubqln1Q8R317 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ubqln1Q8R317 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ubqln1Q8R317 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ubqln1Q8R317 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ubqln1Q8R317 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC13.16□□□□□ -0.3
Ubqln1Q8R317 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ubqln1Q8R317 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ubqln1Q8R317 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ubqln1Q8R317 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ubqln1Q8R317 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ubqln1Q8R317 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Ubqln1Q8R317 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ubqln1Q8R317 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ubqln1Q8R317 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC13.16□□□□□ -0.3
Ubqln1Q8R317 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Ubqln1Q8R317 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ubqln1Q8R317 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ubqln1Q8R317 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ubqln1Q8R317 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ubqln1Q8R317 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC13.16□□□□□ -0.3
Ubqln1Q8R317 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ubqln1Q8R317 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ubqln1Q8R317 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ubqln1Q8R317 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ubqln1Q8R317 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ubqln1Q8R317 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ubqln1Q8R317 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ubqln1Q8R317 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Ubqln1Q8R317 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ubqln1Q8R317 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ubqln1Q8R317 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Ubqln1Q8R317 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Ubqln1Q8R317 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ubqln1Q8R317 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ubqln1Q8R317 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ubqln1Q8R317 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Ubqln1Q8R317 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ubqln1Q8R317 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ubqln1Q8R317 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ubqln1Q8R317 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ubqln1Q8R317 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ubqln1Q8R317 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ubqln1Q8R317 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ubqln1Q8R317 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ubqln1Q8R317 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.15□□□□□ -0.3
Ubqln1Q8R317 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Ubqln1Q8R317 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ubqln1Q8R317 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ubqln1Q8R317 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ubqln1Q8R317 Gm3436-201ENSMUST00000179930 840 ntBASIC13.15□□□□□ -0.3
Ubqln1Q8R317 Gm27321-201ENSMUST00000185021 205 ntBASIC13.15□□□□□ -0.3
Ubqln1Q8R317 AC153872.1-201ENSMUST00000199539 128 ntBASIC13.15□□□□□ -0.3
Ubqln1Q8R317 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ubqln1Q8R317 AC149294.4-201ENSMUST00000227870 882 ntBASIC13.15□□□□□ -0.3
Ubqln1Q8R317 CT030704.2-201ENSMUST00000228887 494 ntBASIC13.15□□□□□ -0.3
Ubqln1Q8R317 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ubqln1Q8R317 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ubqln1Q8R317 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC13.15□□□□□ -0.3
Ubqln1Q8R317 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ubqln1Q8R317 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.15□□□□□ -0.3
Ubqln1Q8R317 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ubqln1Q8R317 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Ubqln1Q8R317 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ubqln1Q8R317 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Ubqln1Q8R317 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ubqln1Q8R317 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
Ubqln1Q8R317 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ubqln1Q8R317 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ubqln1Q8R317 AC114543.1-201ENSMUST00000226451 1558 ntBASIC13.15□□□□□ -0.3
Ubqln1Q8R317 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ubqln1Q8R317 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ubqln1Q8R317 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Ubqln1Q8R317 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ubqln1Q8R317 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC13.14□□□□□ -0.31
Ubqln1Q8R317 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ubqln1Q8R317 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ubqln1Q8R317 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ubqln1Q8R317 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ubqln1Q8R317 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ubqln1Q8R317 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ubqln1Q8R317 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Ubqln1Q8R317 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ubqln1Q8R317 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ubqln1Q8R317 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ubqln1Q8R317 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ubqln1Q8R317 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms