Protein–RNA interactions for Protein: Q8K243

Trim68, E3 ubiquitin-protein ligase TRIM68, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim68Q8K243 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim68Q8K243 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC15.06■□□□□ 0
Trim68Q8K243 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim68Q8K243 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim68Q8K243 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trim68Q8K243 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trim68Q8K243 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Trim68Q8K243 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trim68Q8K243 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Trim68Q8K243 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Trim68Q8K243 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC15.05■□□□□ 0
Trim68Q8K243 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC15.05■□□□□ 0
Trim68Q8K243 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Trim68Q8K243 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trim68Q8K243 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Trim68Q8K243 Mir692-1-201ENSMUST00000102263 109 ntBASIC15.05■□□□□ -0
Trim68Q8K243 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trim68Q8K243 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Trim68Q8K243 Gm8835-201ENSMUST00000173096 1169 ntBASIC15.05■□□□□ -0
Trim68Q8K243 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC15.05■□□□□ -0
Trim68Q8K243 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC15.05■□□□□ -0
Trim68Q8K243 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC15.05■□□□□ -0
Trim68Q8K243 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Trim68Q8K243 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Trim68Q8K243 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trim68Q8K243 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trim68Q8K243 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Trim68Q8K243 Gm5763-201ENSMUST00000155951 1530 ntBASIC15.05■□□□□ -0
Trim68Q8K243 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC15.05■□□□□ -0
Trim68Q8K243 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trim68Q8K243 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trim68Q8K243 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC15.05■□□□□ -0
Trim68Q8K243 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC15.05■□□□□ -0
Trim68Q8K243 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trim68Q8K243 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Trim68Q8K243 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Trim68Q8K243 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Trim68Q8K243 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC15.04■□□□□ -0
Trim68Q8K243 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Trim68Q8K243 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim68Q8K243 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Trim68Q8K243 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Trim68Q8K243 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC15.04■□□□□ -0
Trim68Q8K243 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim68Q8K243 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Trim68Q8K243 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Trim68Q8K243 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim68Q8K243 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trim68Q8K243 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trim68Q8K243 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim68Q8K243 Gm45667-201ENSMUST00000210380 1316 ntBASIC15.04■□□□□ -0
Trim68Q8K243 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Trim68Q8K243 Trav13-3-201ENSMUST00000117226 336 ntBASIC15.04■□□□□ -0
Trim68Q8K243 Gm15460-201ENSMUST00000118147 391 ntBASIC15.04■□□□□ -0
Trim68Q8K243 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trim68Q8K243 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trim68Q8K243 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC15.04■□□□□ -0
Trim68Q8K243 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC15.04■□□□□ -0
Trim68Q8K243 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
Trim68Q8K243 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Trim68Q8K243 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim68Q8K243 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC15.04■□□□□ -0
Trim68Q8K243 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC15.04■□□□□ -0
Trim68Q8K243 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Trim68Q8K243 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC15.04■□□□□ -0
Trim68Q8K243 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Trim68Q8K243 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim68Q8K243 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC15.04■□□□□ -0
Trim68Q8K243 Gm37691-201ENSMUST00000192147 2573 ntBASIC15.04■□□□□ -0
Trim68Q8K243 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC15.04■□□□□ -0
Trim68Q8K243 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trim68Q8K243 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim68Q8K243 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim68Q8K243 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trim68Q8K243 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trim68Q8K243 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
Trim68Q8K243 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim68Q8K243 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trim68Q8K243 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trim68Q8K243 Gm43195-201ENSMUST00000200614 2332 ntBASIC15.03■□□□□ -0
Trim68Q8K243 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim68Q8K243 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Trim68Q8K243 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim68Q8K243 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Trim68Q8K243 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC15.03■□□□□ -0
Trim68Q8K243 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC15.03■□□□□ -0
Trim68Q8K243 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC15.03■□□□□ -0
Trim68Q8K243 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trim68Q8K243 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Trim68Q8K243 AA619741-201ENSMUST00000195095 646 ntBASIC15.03■□□□□ -0
Trim68Q8K243 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC15.03■□□□□ -0
Trim68Q8K243 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trim68Q8K243 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC15.03■□□□□ -0
Trim68Q8K243 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC15.03■□□□□ -0
Trim68Q8K243 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC15.03■□□□□ -0
Trim68Q8K243 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Trim68Q8K243 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim68Q8K243 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC15.03■□□□□ -0
Trim68Q8K243 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Trim68Q8K243 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms