Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clip4Q8CI96 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Clip4Q8CI96 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clip4Q8CI96 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clip4Q8CI96 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC14□□□□□ -0.17
Clip4Q8CI96 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clip4Q8CI96 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clip4Q8CI96 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Clip4Q8CI96 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clip4Q8CI96 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Clip4Q8CI96 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Clip4Q8CI96 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clip4Q8CI96 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clip4Q8CI96 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Clip4Q8CI96 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
Clip4Q8CI96 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Clip4Q8CI96 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clip4Q8CI96 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clip4Q8CI96 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clip4Q8CI96 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clip4Q8CI96 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clip4Q8CI96 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC13.99□□□□□ -0.17
Clip4Q8CI96 Gm13223-201ENSMUST00000118609 747 ntBASIC13.99□□□□□ -0.17
Clip4Q8CI96 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
Clip4Q8CI96 Gm9719-201ENSMUST00000162765 543 ntBASIC13.99□□□□□ -0.17
Clip4Q8CI96 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clip4Q8CI96 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Clip4Q8CI96 Gm17837-201ENSMUST00000186435 985 ntBASIC13.99□□□□□ -0.17
Clip4Q8CI96 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Clip4Q8CI96 Rbfox2-208ENSMUST00000227930 1218 ntBASIC13.99□□□□□ -0.17
Clip4Q8CI96 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Clip4Q8CI96 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clip4Q8CI96 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Clip4Q8CI96 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Clip4Q8CI96 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clip4Q8CI96 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clip4Q8CI96 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clip4Q8CI96 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clip4Q8CI96 Gm38102-201ENSMUST00000192791 1935 ntBASIC13.99□□□□□ -0.17
Clip4Q8CI96 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clip4Q8CI96 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clip4Q8CI96 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Clip4Q8CI96 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
Clip4Q8CI96 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clip4Q8CI96 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Clip4Q8CI96 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clip4Q8CI96 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC13.98□□□□□ -0.17
Clip4Q8CI96 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Clip4Q8CI96 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clip4Q8CI96 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Clip4Q8CI96 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Clip4Q8CI96 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clip4Q8CI96 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clip4Q8CI96 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clip4Q8CI96 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clip4Q8CI96 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Clip4Q8CI96 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clip4Q8CI96 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Clip4Q8CI96 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clip4Q8CI96 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC13.98□□□□□ -0.17
Clip4Q8CI96 Gm20949-201ENSMUST00000206478 952 ntBASIC13.98□□□□□ -0.17
Clip4Q8CI96 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC13.98□□□□□ -0.17
Clip4Q8CI96 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clip4Q8CI96 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clip4Q8CI96 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clip4Q8CI96 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Clip4Q8CI96 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC13.98□□□□□ -0.17
Clip4Q8CI96 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clip4Q8CI96 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clip4Q8CI96 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clip4Q8CI96 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clip4Q8CI96 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clip4Q8CI96 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clip4Q8CI96 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clip4Q8CI96 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Clip4Q8CI96 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clip4Q8CI96 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Clip4Q8CI96 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Clip4Q8CI96 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Clip4Q8CI96 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Clip4Q8CI96 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clip4Q8CI96 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clip4Q8CI96 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clip4Q8CI96 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clip4Q8CI96 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clip4Q8CI96 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clip4Q8CI96 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Clip4Q8CI96 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC13.97□□□□□ -0.17
Clip4Q8CI96 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clip4Q8CI96 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Clip4Q8CI96 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clip4Q8CI96 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Clip4Q8CI96 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Clip4Q8CI96 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Clip4Q8CI96 Gm6888-201ENSMUST00000221983 706 ntBASIC13.97□□□□□ -0.17
Clip4Q8CI96 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC13.97□□□□□ -0.17
Clip4Q8CI96 AC090659.2-201ENSMUST00000225378 1186 ntBASIC13.97□□□□□ -0.17
Clip4Q8CI96 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clip4Q8CI96 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clip4Q8CI96 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 69.1 ms