Protein–RNA interactions for Protein: Q8CGP0

Hist3h2bb, Histone H2B type 3-B, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist3h2bbQ8CGP0 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hist3h2bbQ8CGP0 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Hist3h2bbQ8CGP0 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC10.43□□□□□ -0.74
Hist3h2bbQ8CGP0 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hist3h2bbQ8CGP0 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hist3h2bbQ8CGP0 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Hist3h2bbQ8CGP0 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hist3h2bbQ8CGP0 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC10.43□□□□□ -0.74
Hist3h2bbQ8CGP0 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC10.43□□□□□ -0.74
Hist3h2bbQ8CGP0 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC10.43□□□□□ -0.74
Hist3h2bbQ8CGP0 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Hist3h2bbQ8CGP0 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Hist3h2bbQ8CGP0 Daam2-202ENSMUST00000224595 1926 ntBASIC10.43□□□□□ -0.74
Hist3h2bbQ8CGP0 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC10.43□□□□□ -0.74
Hist3h2bbQ8CGP0 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hist3h2bbQ8CGP0 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hist3h2bbQ8CGP0 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Hist3h2bbQ8CGP0 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Hist3h2bbQ8CGP0 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC10.43□□□□□ -0.74
Hist3h2bbQ8CGP0 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC10.43□□□□□ -0.74
Hist3h2bbQ8CGP0 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Hist3h2bbQ8CGP0 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Hist3h2bbQ8CGP0 Gm7370-201ENSMUST00000219471 767 ntBASIC10.43□□□□□ -0.74
Hist3h2bbQ8CGP0 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hist3h2bbQ8CGP0 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC10.43□□□□□ -0.74
Hist3h2bbQ8CGP0 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC10.43□□□□□ -0.74
Hist3h2bbQ8CGP0 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hist3h2bbQ8CGP0 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hist3h2bbQ8CGP0 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hist3h2bbQ8CGP0 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hist3h2bbQ8CGP0 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Hist3h2bbQ8CGP0 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC10.43□□□□□ -0.74
Hist3h2bbQ8CGP0 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC10.43□□□□□ -0.74
Hist3h2bbQ8CGP0 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Hist3h2bbQ8CGP0 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hist3h2bbQ8CGP0 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hist3h2bbQ8CGP0 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC10.43□□□□□ -0.74
Hist3h2bbQ8CGP0 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hist3h2bbQ8CGP0 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hist3h2bbQ8CGP0 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hist3h2bbQ8CGP0 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hist3h2bbQ8CGP0 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hist3h2bbQ8CGP0 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Hist3h2bbQ8CGP0 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hist3h2bbQ8CGP0 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hist3h2bbQ8CGP0 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hist3h2bbQ8CGP0 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC10.42□□□□□ -0.74
Hist3h2bbQ8CGP0 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Hist3h2bbQ8CGP0 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hist3h2bbQ8CGP0 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hist3h2bbQ8CGP0 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hist3h2bbQ8CGP0 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Hist3h2bbQ8CGP0 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hist3h2bbQ8CGP0 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hist3h2bbQ8CGP0 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Hist3h2bbQ8CGP0 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Hist3h2bbQ8CGP0 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC10.42□□□□□ -0.74
Hist3h2bbQ8CGP0 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Hist3h2bbQ8CGP0 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hist3h2bbQ8CGP0 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hist3h2bbQ8CGP0 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC10.42□□□□□ -0.74
Hist3h2bbQ8CGP0 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Hist3h2bbQ8CGP0 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC10.42□□□□□ -0.74
Hist3h2bbQ8CGP0 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hist3h2bbQ8CGP0 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hist3h2bbQ8CGP0 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Hist3h2bbQ8CGP0 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hist3h2bbQ8CGP0 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hist3h2bbQ8CGP0 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hist3h2bbQ8CGP0 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hist3h2bbQ8CGP0 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC10.42□□□□□ -0.74
Hist3h2bbQ8CGP0 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hist3h2bbQ8CGP0 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Hist3h2bbQ8CGP0 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hist3h2bbQ8CGP0 Gm5763-201ENSMUST00000155951 1530 ntBASIC10.42□□□□□ -0.74
Hist3h2bbQ8CGP0 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Hist3h2bbQ8CGP0 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hist3h2bbQ8CGP0 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Hist3h2bbQ8CGP0 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hist3h2bbQ8CGP0 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Hist3h2bbQ8CGP0 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hist3h2bbQ8CGP0 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hist3h2bbQ8CGP0 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Hist3h2bbQ8CGP0 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hist3h2bbQ8CGP0 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hist3h2bbQ8CGP0 Gm45532-201ENSMUST00000210342 3620 ntBASIC10.41□□□□□ -0.74
Hist3h2bbQ8CGP0 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Hist3h2bbQ8CGP0 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Hist3h2bbQ8CGP0 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hist3h2bbQ8CGP0 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hist3h2bbQ8CGP0 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hist3h2bbQ8CGP0 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC10.41□□□□□ -0.74
Hist3h2bbQ8CGP0 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Hist3h2bbQ8CGP0 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hist3h2bbQ8CGP0 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hist3h2bbQ8CGP0 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC10.41□□□□□ -0.74
Hist3h2bbQ8CGP0 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hist3h2bbQ8CGP0 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hist3h2bbQ8CGP0 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC10.41□□□□□ -0.74
Hist3h2bbQ8CGP0 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms