Protein–RNA interactions for Protein: Q8C7N7

Aph1b, Gamma-secretase subunit APH-1B, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aph1bQ8C7N7 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
Aph1bQ8C7N7 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Aph1bQ8C7N7 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Aph1bQ8C7N7 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Aph1bQ8C7N7 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Aph1bQ8C7N7 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Aph1bQ8C7N7 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Aph1bQ8C7N7 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Aph1bQ8C7N7 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Aph1bQ8C7N7 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Aph1bQ8C7N7 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Aph1bQ8C7N7 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Aph1bQ8C7N7 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC13.71□□□□□ -0.21
Aph1bQ8C7N7 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Aph1bQ8C7N7 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Aph1bQ8C7N7 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Aph1bQ8C7N7 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Aph1bQ8C7N7 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Aph1bQ8C7N7 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Aph1bQ8C7N7 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Aph1bQ8C7N7 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
Aph1bQ8C7N7 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Aph1bQ8C7N7 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
Aph1bQ8C7N7 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Aph1bQ8C7N7 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Aph1bQ8C7N7 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Aph1bQ8C7N7 Gm28630-201ENSMUST00000187806 498 ntBASIC13.71□□□□□ -0.21
Aph1bQ8C7N7 Gm4971-201ENSMUST00000205991 1108 ntBASIC13.71□□□□□ -0.21
Aph1bQ8C7N7 CT943659.1-201ENSMUST00000215459 326 ntBASIC13.71□□□□□ -0.21
Aph1bQ8C7N7 AC121804.3-201ENSMUST00000223420 295 ntBASIC13.71□□□□□ -0.21
Aph1bQ8C7N7 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Aph1bQ8C7N7 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Aph1bQ8C7N7 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Aph1bQ8C7N7 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.71□□□□□ -0.21
Aph1bQ8C7N7 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Aph1bQ8C7N7 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Aph1bQ8C7N7 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Aph1bQ8C7N7 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Aph1bQ8C7N7 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Aph1bQ8C7N7 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Aph1bQ8C7N7 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Aph1bQ8C7N7 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Aph1bQ8C7N7 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Aph1bQ8C7N7 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Aph1bQ8C7N7 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Aph1bQ8C7N7 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Aph1bQ8C7N7 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Aph1bQ8C7N7 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Aph1bQ8C7N7 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Aph1bQ8C7N7 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Aph1bQ8C7N7 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Aph1bQ8C7N7 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Aph1bQ8C7N7 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Aph1bQ8C7N7 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Aph1bQ8C7N7 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Aph1bQ8C7N7 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Aph1bQ8C7N7 Gm24543-201ENSMUST00000103867 82 ntBASIC13.7□□□□□ -0.22
Aph1bQ8C7N7 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Aph1bQ8C7N7 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC13.7□□□□□ -0.22
Aph1bQ8C7N7 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Aph1bQ8C7N7 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Aph1bQ8C7N7 Gm5779-201ENSMUST00000218467 910 ntBASIC13.7□□□□□ -0.22
Aph1bQ8C7N7 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Aph1bQ8C7N7 AC154806.6-201ENSMUST00000228192 202 ntBASIC13.7□□□□□ -0.22
Aph1bQ8C7N7 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Aph1bQ8C7N7 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Aph1bQ8C7N7 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Aph1bQ8C7N7 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Aph1bQ8C7N7 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Aph1bQ8C7N7 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Aph1bQ8C7N7 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Aph1bQ8C7N7 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Aph1bQ8C7N7 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Aph1bQ8C7N7 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Aph1bQ8C7N7 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.69□□□□□ -0.22
Aph1bQ8C7N7 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
Aph1bQ8C7N7 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Aph1bQ8C7N7 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Aph1bQ8C7N7 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Aph1bQ8C7N7 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Aph1bQ8C7N7 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.69□□□□□ -0.22
Aph1bQ8C7N7 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Aph1bQ8C7N7 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Aph1bQ8C7N7 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Aph1bQ8C7N7 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Aph1bQ8C7N7 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Aph1bQ8C7N7 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.69□□□□□ -0.22
Aph1bQ8C7N7 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Aph1bQ8C7N7 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Aph1bQ8C7N7 Gm11594-201ENSMUST00000122313 162 ntBASIC13.69□□□□□ -0.22
Aph1bQ8C7N7 Gm25925-201ENSMUST00000158314 306 ntBASIC13.69□□□□□ -0.22
Aph1bQ8C7N7 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC13.69□□□□□ -0.22
Aph1bQ8C7N7 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC13.69□□□□□ -0.22
Aph1bQ8C7N7 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC13.69□□□□□ -0.22
Aph1bQ8C7N7 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC13.69□□□□□ -0.22
Aph1bQ8C7N7 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC13.69□□□□□ -0.22
Aph1bQ8C7N7 Ighv1-51-201ENSMUST00000192903 354 ntBASIC13.69□□□□□ -0.22
Aph1bQ8C7N7 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC13.69□□□□□ -0.22
Aph1bQ8C7N7 Gm44719-201ENSMUST00000206404 149 ntBASIC13.69□□□□□ -0.22
Aph1bQ8C7N7 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms