Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim9Q8C7M3 Gm7390-201ENSMUST00000212452 1216 ntBASIC15.29■□□□□ 0.04
Trim9Q8C7M3 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Trim9Q8C7M3 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Trim9Q8C7M3 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim9Q8C7M3 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC15.29■□□□□ 0.04
Trim9Q8C7M3 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim9Q8C7M3 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim9Q8C7M3 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim9Q8C7M3 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trim9Q8C7M3 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Trim9Q8C7M3 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim9Q8C7M3 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim9Q8C7M3 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim9Q8C7M3 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim9Q8C7M3 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Trim9Q8C7M3 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim9Q8C7M3 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Trim9Q8C7M3 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim9Q8C7M3 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim9Q8C7M3 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim9Q8C7M3 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC15.28■□□□□ 0.04
Trim9Q8C7M3 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim9Q8C7M3 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim9Q8C7M3 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim9Q8C7M3 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trim9Q8C7M3 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Trim9Q8C7M3 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trim9Q8C7M3 Gm6912-201ENSMUST00000117218 544 ntBASIC15.28■□□□□ 0.04
Trim9Q8C7M3 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
Trim9Q8C7M3 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Trim9Q8C7M3 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC15.28■□□□□ 0.04
Trim9Q8C7M3 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trim9Q8C7M3 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC15.28■□□□□ 0.04
Trim9Q8C7M3 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trim9Q8C7M3 Gm5425-201ENSMUST00000214125 459 ntBASIC15.28■□□□□ 0.04
Trim9Q8C7M3 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC15.28■□□□□ 0.04
Trim9Q8C7M3 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC15.28■□□□□ 0.04
Trim9Q8C7M3 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim9Q8C7M3 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim9Q8C7M3 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim9Q8C7M3 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim9Q8C7M3 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim9Q8C7M3 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim9Q8C7M3 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trim9Q8C7M3 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim9Q8C7M3 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim9Q8C7M3 AC168058.1-201ENSMUST00000219521 2282 ntBASIC15.28■□□□□ 0.04
Trim9Q8C7M3 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim9Q8C7M3 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim9Q8C7M3 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trim9Q8C7M3 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trim9Q8C7M3 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim9Q8C7M3 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim9Q8C7M3 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim9Q8C7M3 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim9Q8C7M3 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trim9Q8C7M3 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim9Q8C7M3 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim9Q8C7M3 Gm10729-202ENSMUST00000193403 1375 ntBASIC15.27■□□□□ 0.04
Trim9Q8C7M3 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Trim9Q8C7M3 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim9Q8C7M3 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trim9Q8C7M3 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC15.27■□□□□ 0.04
Trim9Q8C7M3 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim9Q8C7M3 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
Trim9Q8C7M3 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim9Q8C7M3 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC15.27■□□□□ 0.04
Trim9Q8C7M3 Gm15240-201ENSMUST00000118156 720 ntBASIC15.27■□□□□ 0.04
Trim9Q8C7M3 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC15.27■□□□□ 0.04
Trim9Q8C7M3 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC15.27■□□□□ 0.04
Trim9Q8C7M3 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC15.27■□□□□ 0.04
Trim9Q8C7M3 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC15.27■□□□□ 0.04
Trim9Q8C7M3 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim9Q8C7M3 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim9Q8C7M3 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trim9Q8C7M3 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Trim9Q8C7M3 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.03
Trim9Q8C7M3 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Trim9Q8C7M3 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC15.27■□□□□ 0.03
Trim9Q8C7M3 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Trim9Q8C7M3 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim9Q8C7M3 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim9Q8C7M3 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim9Q8C7M3 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim9Q8C7M3 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim9Q8C7M3 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim9Q8C7M3 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim9Q8C7M3 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim9Q8C7M3 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Trim9Q8C7M3 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
Trim9Q8C7M3 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC15.27■□□□□ 0.03
Trim9Q8C7M3 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim9Q8C7M3 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim9Q8C7M3 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim9Q8C7M3 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim9Q8C7M3 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim9Q8C7M3 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trim9Q8C7M3 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Trim9Q8C7M3 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms