Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp44Q8C2S0 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp44Q8C2S0 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp44Q8C2S0 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp44Q8C2S0 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp44Q8C2S0 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp44Q8C2S0 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC16.19■□□□□ 0.18
Usp44Q8C2S0 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Usp44Q8C2S0 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp44Q8C2S0 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC16.19■□□□□ 0.18
Usp44Q8C2S0 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp44Q8C2S0 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Usp44Q8C2S0 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp44Q8C2S0 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp44Q8C2S0 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Usp44Q8C2S0 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp44Q8C2S0 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Usp44Q8C2S0 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Usp44Q8C2S0 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
Usp44Q8C2S0 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp44Q8C2S0 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC16.19■□□□□ 0.18
Usp44Q8C2S0 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Usp44Q8C2S0 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Usp44Q8C2S0 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC16.19■□□□□ 0.18
Usp44Q8C2S0 Gm27772-201ENSMUST00000184900 187 ntBASIC16.19■□□□□ 0.18
Usp44Q8C2S0 Gm43094-201ENSMUST00000196549 921 ntBASIC16.19■□□□□ 0.18
Usp44Q8C2S0 Gm44855-201ENSMUST00000205725 362 ntBASIC16.19■□□□□ 0.18
Usp44Q8C2S0 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC16.19■□□□□ 0.18
Usp44Q8C2S0 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp44Q8C2S0 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp44Q8C2S0 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp44Q8C2S0 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp44Q8C2S0 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Usp44Q8C2S0 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp44Q8C2S0 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Usp44Q8C2S0 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp44Q8C2S0 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp44Q8C2S0 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Usp44Q8C2S0 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp44Q8C2S0 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp44Q8C2S0 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp44Q8C2S0 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp44Q8C2S0 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp44Q8C2S0 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC16.18■□□□□ 0.18
Usp44Q8C2S0 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp44Q8C2S0 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
Usp44Q8C2S0 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp44Q8C2S0 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp44Q8C2S0 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC16.18■□□□□ 0.18
Usp44Q8C2S0 Gm44443-201ENSMUST00000204396 5633 ntBASIC16.18■□□□□ 0.18
Usp44Q8C2S0 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp44Q8C2S0 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp44Q8C2S0 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Usp44Q8C2S0 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp44Q8C2S0 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp44Q8C2S0 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp44Q8C2S0 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp44Q8C2S0 Gm27437-201ENSMUST00000183429 107 ntBASIC16.18■□□□□ 0.18
Usp44Q8C2S0 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Usp44Q8C2S0 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp44Q8C2S0 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp44Q8C2S0 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Usp44Q8C2S0 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp44Q8C2S0 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Usp44Q8C2S0 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp44Q8C2S0 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Usp44Q8C2S0 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp44Q8C2S0 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC16.18■□□□□ 0.18
Usp44Q8C2S0 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp44Q8C2S0 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp44Q8C2S0 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp44Q8C2S0 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp44Q8C2S0 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp44Q8C2S0 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp44Q8C2S0 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Usp44Q8C2S0 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp44Q8C2S0 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Usp44Q8C2S0 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC16.17■□□□□ 0.18
Usp44Q8C2S0 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Usp44Q8C2S0 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Usp44Q8C2S0 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Usp44Q8C2S0 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp44Q8C2S0 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Usp44Q8C2S0 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp44Q8C2S0 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp44Q8C2S0 Gm2423-201ENSMUST00000074863 733 ntBASIC16.17■□□□□ 0.18
Usp44Q8C2S0 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC16.17■□□□□ 0.18
Usp44Q8C2S0 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp44Q8C2S0 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp44Q8C2S0 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp44Q8C2S0 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp44Q8C2S0 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp44Q8C2S0 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp44Q8C2S0 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp44Q8C2S0 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Usp44Q8C2S0 Ldb3-207ENSMUST00000227819 1499 ntBASIC16.16■□□□□ 0.18
Usp44Q8C2S0 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Usp44Q8C2S0 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Usp44Q8C2S0 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Usp44Q8C2S0 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms